FC925338

Overview
NameFC925338
Unique NameFC925338
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3796 contig Ccv1_Contig3796:17..743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925338 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32
Identity = 79/238 (33.19%), Postives = 127/238 (53.36%), Query Frame = 2
Query:    2 QEQQKASRLVFVLYPSQGHINPMLQLATILHSKGFSITIIHPKFNSPNLSNYPEFTCIPISDNLPESQDSFGDFGIVTALNKNCEGPLTECIQQMLKAEDPQDRLSCIVYDSVMHFSQSVADYLKLPGISVRTGPAATMLAFAVCPRLDEQGYISFLEXXXXXXXXXXXXXXXXXXAFSMKKF--TAPGFLELRAAVTDSVQRCSALIFNTVDFIEQEALTKVQELFSASAFTIGPFH 709
            +E++   R++    P QG INPMLQLA ILH +GFSIT+IH +FN+P  S++P FT + I D L E++   G   ++  +N N E P  +C++++L      +R++C++ D    F+QSV++ LKLP + + T  A    A+   P +  +GY+   E                  +    +F      FL    AV ++  R S LI+ + + +E+++LT   E+F    F IGPFH
Sbjct:    2 EEKRNGLRVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFNAPKASSHPLFTFLQIPDGLSETEIQDGVMSLLAQINLNAESPFRDCLRKVLLESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLPVSESEAEDSVPEFPPLQKRDLSKVFGEFGEKLDPFLH---AVVETTIRSSGLIYMSCEELEKDSLTLSNEIFKVPVFAIGPFH 236          
BLAST of FC925338 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.598e-26
Identity = 76/241 (31.54%), Postives = 124/241 (51.45%), Query Frame = 2
Query:    5 EQQKASRLVFVLYPSQGHINPMLQLATILHSKGFSITIIHPKFNSPNLSNYPEFTCIPISDNLPESQDSFGDFGI-VTALNKNCEGPLTECIQQMLKAED---PQDR-LSCIVYDSVMHFSQSVADYLKLPGISVRTGPAATMLAFAVCPRLDEQGYISFLEXXXXXXXXXXXXXXXXXXAFSMKKFTAPGFLE-LRAAVTDSVQRCSALIFNTVDFIEQEALTKVQELFSASAFTIGPFH 709
            E++   +++    P QG INPMLQLA IL+S+GFSITIIH +FN+P  S++P FT + I D L ESQ    D  + +T LN NC+ P  EC+ +++K       +DR +SC++ DS   F+QSVA+   LP   +     +  L   + P++  +G++   +                  +  M        L+     + D+ +  S +I  +   ++ ++L +  ++FS   F IGPFH
Sbjct:    2 EKRNERQVILFPLPLQGCINPMLQLAKILYSRGFSITIIHTRFNAPKSSDHPLFTFLQIRDGLSESQTQSRDLLLQLTLLNNNCQIPFRECLAKLIKPSSDSGTEDRKISCVIDDSGWVFTQSVAESFNLPRFVLCAYKFSFFLGHFLVPQIRREGFLPVPDSEADDLVPEFPPLRKKDLSRIMGTSAQSKPLDAYLLKILDATKPASGIIVMSCKELDHDSLAESNKVFSIPIFPIGPFH 242          
BLAST of FC925338 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 76/255 (29.80%), Postives = 123/255 (48.24%), Query Frame = 2
Query:   26 LVFVLYPSQGHINPMLQLATILHSKGFSITIIHPKFN---------SPNLSNYPEFTCIPISDNLPES-QDSFGDF-GIVTALNKNCEGPLTECIQQMLKAEDPQDRLSCIVYDSVMHFSQSVADYLKLPGISVRTGPAATMLAF---------AVCPRLDEQGYIS--FLEXXXXXXXXXXXXXXXXXXAFSMKKFTAPGFLELRAAV--TDSVQRCSALIFNTVDFIEQEALTKVQELFSASAFTIGPFHKLA 718
            +V V YP+QGHINPM+++A +LH++GF +T ++  +N         S  L   P F    I+D LPE+  D+  D   +  +  KNC  P  E +Q+ + A D    +SCIV D  M F+  VA+ L +P +   T      LA+          +CP L ++ Y++  +LE                    S  + T P  + +  A+  T+  +R SA+I NT D +E + +  +Q +     +++GP H LA
Sbjct:   14 VVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQR-INAGDNVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCP-LKDESYLTKEYLEDTVIDFIPTMKNVKLKDIP-SFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQSIL-PPVYSVGPLHLLA 264          
BLAST of FC925338 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12
Identity = 60/252 (23.81%), Postives = 108/252 (42.86%), Query Frame = 2
Query:   26 LVFVLYPSQGHINPMLQLATILHSKGFSITIIHPKFN-------------SPNLSNYPEFTCIPISDNLPESQDSFGDFGIVTALNKNCEGPLTECIQQMLKAEDPQDR--LSCIVYDSVMHFSQSVADYLKLPGISVRTGPAATMLAFAVCPRLDEQGYISFLEXXXXXXXXXXXXXXXXXXAFSMKKF---------TAPGFLELRAAV--TDSVQRCSALIFNTVDFIEQEALTKVQELFSASAFTIGP 703
            +V V +P QGH+ P++QLA +LH++G  +T ++ ++N              P  ++   F    I D L  S       G+V +L KNC  P    ++++ +  + QD   ++C+V D VM F+ + A    +P +   T  A  +L +     L E+G + F +                    S  +          T P  + + A +   +S     ALI NT+  +E++ +  +   F    +T+GP
Sbjct:   13 VVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLSLSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDTPLEWVPGMSHMRLRDMPTFCRTTDPDDVMVSATLQQMESAAGSKALILNTLYELEKDVVDALAAFF-PPIYTVGP 263          
The following BLAST results are available for this feature:
BLAST of FC925338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CNGT2_ARATH5.405e-3233.19Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH2.598e-2631.54Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
COGT2_ARATH1.381e-1929.80Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI1.635e-1223.81Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YH21FM1 TF Citrus clementina cDNA clone KN0AAP8YH21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925338 ID=FC925338; Name=FC925338; organism=Citrus clementina; type=EST; length=727bp
ACAAGAACAACAAAAGGCCAGCCGCTTGGTGTTTGTGTTGTATCCATCTC
AAGGCCACATAAATCCTATGCTTCAGCTTGCCACCATCCTTCACTCAAAA
GGCTTTTCAATCACCATCATTCACCCAAAATTCAACTCTCCCAACTTATC
TAATTATCCTGAATTCACATGCATACCCATATCAGATAACTTACCTGAAA
GCCAAGACTCATTTGGGGATTTTGGCATCGTTACCGCTCTTAACAAGAAT
TGTGAAGGACCGTTGACTGAATGCATTCAACAAATGTTGAAAGCAGAGGA
TCCGCAAGATCGGCTTTCGTGTATCGTTTATGACAGCGTTATGCACTTTT
CTCAAAGTGTTGCCGATTATTTAAAGCTTCCGGGAATCAGTGTTCGTACT
GGCCCTGCTGCCACAATGTTGGCCTTCGCTGTCTGTCCTCGTCTTGATGA
GCAAGGTTACATCTCCTTCCTAGAATCTATGTCCCTGGACGGAAAGAGCG
ATCTCCTGTCCCTCCTGCTTAAGGAACTAGCTTTTTCAATGAAAAAATTT
ACAGCCCCTGGTTTCTTAGAGTTAAGAGCTGCTGTAACAGATTCAGTGCA
AAGGTGTTCGGCTCTCATTTTTAACACAGTTGATTTCATTGAACAAGAAG
CACTAACAAAAGTTCAAGAACTATTCTCAGCTTCAGCTTTCACCATAGGT
CCTTTTCACAAATTAGCGCCAACCATT
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