FC925340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_ARATH (Elongator complex protein 3 OS=Arabidopsis thaliana GN=HAG3 PE=1 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 1.861e-102 Identity = 178/192 (92.71%), Postives = 186/192 (96.88%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 IL+ +PPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHH+IKPE+VELVRRDY ANEGWETFLSYEDTRQDILVGLLRLRKCG+NVTCPELMGKCS+VRELHVYGTAVPVHGR+ADKLQHQGYGTLLMEEAERIA EHRS K+ VISGVGTRHYYRKLGYELEGPYMV Sbjct: 370 ILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNVTCPELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSNKIGVISGVGTRHYYRKLGYELEGPYMV 561
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_ORYSJ (Elongator complex protein 3 OS=Oryza sativa subsp. japonica GN=ELP3 PE=2 SV=2) HSP 1 Score: 367.851 bits (943), Expect = 2.058e-101 Identity = 175/192 (91.15%), Postives = 188/192 (97.92%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 IL+ +PPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM+DLGLKCRDVRTREAGIQDIHH+I+P+EVELVRRDY ANEGWETFLSYEDT+QDIL+GLLRLRKCGRNVTCPEL+G+CSIVRELHVYGTAVPVHGR+ADKLQHQGYGTLLMEEAERIA EHRS+K+AVISGVGTRHYYRKLGYELEGPYMV Sbjct: 378 ILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHKIRPDEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLRKCGRNVTCPELVGRCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSKKIAVISGVGTRHYYRKLGYELEGPYMV 569
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_DROME (Probable elongator complex protein 3 OS=Drosophila melanogaster GN=Elp3 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 1.811e-81 Identity = 145/191 (75.92%), Postives = 165/191 (86.39%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYM 574 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG CRDVRTRE GIQ+IH++++P E+EL+RRDYVAN GWETFLSYED QDILVGLLRLRKC + PEL G+CSIVRELHVYG+ VPV+ R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GY+L+GPYM Sbjct: 354 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPELKGECSIVRELHVYGSVVPVNARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNYYRKMGYQLDGPYM 544
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_XENTR (Elongator complex protein 3 OS=Xenopus tropicalis GN=elp3 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 2.366e-81 Identity = 147/192 (76.56%), Postives = 163/192 (84.90%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHH+++P +VEL+RRDYVAN GWETFLSYED QDIL+GLLRLRKC PEL G SIVRELHVYG+ VP+ R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRKLGYELEGPYMV Sbjct: 354 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEQSFRPELKGGVSIVRELHVYGSVVPISSRDPSKFQHQGFGMLLMEEAERIAREEHGSCKIAVISGVGTRNYYRKLGYELEGPYMV 545
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_XENLA (Elongator complex protein 3 OS=Xenopus laevis GN=elp3 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 3.089e-81 Identity = 146/192 (76.04%), Postives = 163/192 (84.90%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHH+++P +VEL+RRDYVAN GWETFLSYED QDIL+GLLRLRKC PEL G SIVRELHVYG+ VP+ R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GYELEGPYMV Sbjct: 354 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEESFRPELKGGVSIVRELHVYGSVVPISSRDPSKFQHQGFGMLLMEEAERIARDEHGSWKIAVISGVGTRNYYRKIGYELEGPYMV 545
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_DICDI (Probable elongator complex protein 3 OS=Dictyostelium discoideum GN=elp3 PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 3.089e-81 Identity = 142/191 (74.35%), Postives = 162/191 (84.82%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYM 574 +LA +PPWTR+YR+QRDIPMPLVTSGVE GNLREL LARM D G KCRDVRTRE GIQ++HH+IKP++VEL+RRDYVAN GWETFLS+ED +QDIL+GLLRLRKC PEL CSIVRELHVYG+ V +H R+ K QHQGYGTLLMEEAERIA EH S K+AVI+GVGTRHYYRKLGYEL+G Y+ Sbjct: 364 VLALVPPWTRIYRIQRDIPMPLVTSGVEYGNLRELCLARMKDFGTKCRDVRTREVGIQEVHHKIKPDQVELIRRDYVANGGWETFLSFEDPKQDILIGLLRLRKCSETSFRPELKENCSIVRELHVYGSVVGIHNRDPTKFQHQGYGTLLMEEAERIAREEHGSIKLAVIAGVGTRHYYRKLGYELDGVYV 554
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_CHICK (Elongator complex protein 3 OS=Gallus gallus GN=ELP3 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 3.089e-81 Identity = 147/192 (76.56%), Postives = 163/192 (84.90%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHH+++P ++EL+RRDYVAN GWETFLSYED QDILVGLLRLRKC PEL G SIVRELHVYG+ VPV R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GYELEGPYMV Sbjct: 351 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTQCRDVRTREVGIQEIHHKVRPYQIELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRKCSEESFRPELKGGVSIVRELHVYGSVVPVSSRDPSKFQHQGFGMLLMEEAERIAKEEHGSWKIAVISGVGTRNYYRKIGYELEGPYMV 542
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_DANRE (Elongator complex protein 3 OS=Danio rerio GN=elp3 PE=2 SV=3) HSP 1 Score: 298.901 bits (764), Expect = 1.174e-80 Identity = 144/192 (75.00%), Postives = 163/192 (84.90%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM D+G +CRDVRTRE GIQ+IHH+++P +VEL+RRDYVAN GWETFLSYED QDIL+GLLRLR+C PEL G SIVRELHVYG+ VPV R+ K QHQG+G +LMEEAERIA EH S K+AVISGVGTR+YYRK+GYELEGPYMV Sbjct: 353 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKGGVSIVRELHVYGSVVPVSSRDPSKFQHQGFGMMLMEEAERIARDEHGSSKLAVISGVGTRNYYRKMGYELEGPYMV 544
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_MOUSE (Elongator complex protein 3 OS=Mus musculus GN=Elp3 PE=2 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 2.892e-79 Identity = 145/192 (75.52%), Postives = 161/192 (83.85%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELA ARM DLG++CRDVRTRE GIQ+IHH+++P +VELVRRDYVAN GWETFLSYED QDIL+GLLRLRKC EL G SIVRELHVYG+ VPV R+ K QHQG+G LLMEEAERIA EH S KMAVISGVGTR+YYRK+GY L+GPYMV Sbjct: 352 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHRVRPYQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAERIAREEHGSGKMAVISGVGTRNYYRKIGYRLQGPYMV 543
BLAST of FC925340 vs. ExPASy Swiss-Prot
Match: ELP3_HUMAN (Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 2.892e-79 Identity = 145/192 (75.52%), Postives = 162/192 (84.38%), Query Frame = 2 Query: 2 ILAPLPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHQIKPEEVELVRRDYVANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPELMGKCSIVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIALGEHRSRKMAVISGVGTRHYYRKLGYELEGPYMV 577 ILA +PPWTRVYRVQRDIPMPLV+SGVE GNLRELALARM DLG++CRDVRTRE GIQ+IHH+++P +VELVRRDYVAN GWETFLSYED QDIL+GLLRLRKC EL G SIVRELHVYG+ VPV R+ K QHQG+G LLMEEAERIA EH S K+AVISGVGTR+YYRK+GY L+GPYMV Sbjct: 352 ILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGIQCRDVRTREVGIQEIHHKVRPYQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKIGYRLQGPYMV 543 The following BLAST results are available for this feature:
BLAST of FC925340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925340 ID=FC925340; Name=FC925340; organism=Citrus clementina; type=EST; length=578bpback to top |