FC925341

Overview
NameFC925341
Unique NameFC925341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7036 contig Ccv1_Contig7036:106..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 1.669e-111
Identity = 190/212 (89.62%), Postives = 203/212 (95.75%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            MS TAGQVIRC+AAVAWEAGKPLVIEEVEVAPPQ NEVR+KILFTSLCHTDVYFWEAKGQ PLFPRI+GHEAGGIVESVGEGVTDL+ GDHVLPVFTGECK+C HC SEESNMCDLLRINTDRGVM++DG+SRFSIKGKPIYHFVGTSTFSEYTV HVGC+AKINP+APLDKVC+LSCGISTG GAT+NVAKPKKG TVA+FGLGAVGLAAA
Sbjct:    1 MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAA 212          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 2.040e-109
Identity = 191/211 (90.52%), Postives = 198/211 (93.84%), Query Frame = 2
Query:   26 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            S TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQK EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGEC++C HC SEESNMCDLLRINTDRGVMI+DGQ+RFS  GKPIYHFVGTSTFSEYTV H GCV KI+P APLDKVCVLSCGISTG GAT+NVAKP KG TVAIFGLGAVGLAAA
Sbjct:    3 SNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAA 213          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 394.43 bits (1012), Expect = 2.665e-109
Identity = 190/209 (90.91%), Postives = 196/209 (93.78%), Query Frame = 2
Query:   32 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            TAG+VI+CKAAVAWEA KPLVIEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKVCVLSCGISTG GAT+NVAKP KG TVAIFGLGAVGLAAA
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAA 211          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 2.665e-109
Identity = 190/209 (90.91%), Postives = 196/209 (93.78%), Query Frame = 2
Query:   32 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            TAG+VI+CKAAVAWEA KPLVIEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKVCVLSCGISTG GAT+NVAKP KG TVAIFGLGAVGLAAA
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAA 211          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.322e-108
Identity = 187/212 (88.21%), Postives = 197/212 (92.92%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            MS TAGQVI+C+AAVAWEAGKPLVIEEVEVAPPQ  EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNMC+LLRINTDRGVMIND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKVC+LSCGI TG GATVNVAKPK G +VAIFGLGAVGLAAA
Sbjct:    1 MSNTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAA 212          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 391.734 bits (1005), Expect = 1.727e-108
Identity = 185/209 (88.52%), Postives = 198/209 (94.74%), Query Frame = 2
Query:   32 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            T GQ+IRCKAAVAWEAGKPLVIEEVEVAPPQK+EVR+KILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLP+FTGEC EC HCHSEESNMCDLLRINT+RG MI+DG+SRFSI GKPIYHF+GTSTFSEYTV H G VAKINP APLDKVC++SCG+STG GAT+NVAKPKKGQ+VAIFGLGAVGL AA
Sbjct:    3 TTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAA 211          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.256e-108
Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GAT+NVAKP KG +VAIFGLGAVGLAAA
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAA 212          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.256e-108
Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GAT+NVAKP KG +VAIFGLGAVGLAAA
Sbjct:    1 MSTTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAA 212          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 2.946e-108
Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GAT+NVAKP KG +VAIFGLGAVGLAAA
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAA 212          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 2.946e-108
Identity = 184/212 (86.79%), Postives = 196/212 (92.45%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            MS T GQ+I+C+AAVAWEAGKPLVIEEVEVAPPQ  EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNMCDLLRINTDRGVM+ND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKVC+LSCGI TG GAT+NVAKPK G +VAIFGLGAVGLAAA
Sbjct:    1 MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAA 212          
The following BLAST results are available for this feature:
BLAST of FC925341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
ADH_MALDO1.669e-11189.62Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PETHY2.040e-10990.52Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_ORYSJ2.665e-10990.91Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI2.665e-10990.91Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH1_TRIRP1.322e-10888.21Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_ARATH1.727e-10888.52Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH3_SOLTU2.256e-10888.68Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU2.256e-10888.68Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU2.946e-10888.68Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PEA2.946e-10886.79Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YH22FM1 TF Citrus clementina cDNA clone KN0AAP8YH22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925341 ID=FC925341; Name=FC925341; organism=Citrus clementina; type=EST; length=659bp
AGTATCATCATTCATCATCAATATGTCTGGCACAGCTGGTCAAGTTATTC
GCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGCCACTAGTGATTGAA
GAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTTCGATTGAAGATCCT
CTTCACCTCTTTATGCCATACTGATGTTTACTTCTGGGAAGCCAAAGGAC
AAACACCTCTCTTTCCTCGCATTTTTGGTCATGAAGCTGGAGGGATTGTA
GAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCAGGAGACCATGTTCT
TCCTGTATTCACAGGAGAGTGCAAGGAATGTCCTCACTGTCATTCAGAGG
AAAGCAATATGTGTGACCTCCTCCGGATCAATACTGACAGGGGTGTTATG
ATTAATGATGGTCAGTCAAGGTTCTCGATTAAGGGGAAGCCAATTTACCA
TTTTGTGGGCACTTCTACCTTCAGTGAATACACTGTTACCCACGTCGGTT
GTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACAAAGTTTGTGTACTC
AGCTGCGGAATCTCCACAGGTTTTGGGGCTACTGTTAATGTTGCCAAACC
GAAAAAGGGCCAGACTGTTGCCATTTTTGGATTGGGTGCAGTTGGCCTTG
CTGCTGCCG
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