FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 9.269e-99 Identity = 180/188 (95.74%), Postives = 183/188 (97.34%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 566 VEK TSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCN KAIGS SEGADSSLQEQ+NKDLTLQEAETIALSILKQVMEEKVTPNNVDIA+VAPTYHLYTPSEVEAVI+RL Sbjct: 50 VEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 2.982e-97 Identity = 177/188 (94.15%), Postives = 182/188 (96.81%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 566 VEK TSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA+CDLALRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGS SEGADSSLQEQYNK+LTLQEAETIALSILKQVMEEKVTPNNVDIA+V+P YHLYTP+EVEAVI RL Sbjct: 50 VEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 352.829 bits (904), Expect = 8.675e-97 Identity = 175/188 (93.09%), Postives = 182/188 (96.81%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 566 VEK TSPLLEPSSVEKIMEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGS SEGADSSLQEQ+NKD+TLQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI+RL Sbjct: 50 VEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 3.297e-96 Identity = 175/188 (93.09%), Postives = 181/188 (96.28%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 566 VEK TSPLLEPSSVEKIMEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGS SEGADSSLQEQ+NKDL+LQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI RL Sbjct: 50 VEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.067e-62 Identity = 118/194 (60.82%), Postives = 151/194 (77.84%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE---GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVINRL 566 VEK TSPLLEPSS++K++EID H+ CA+SGL+ADART+++HAR+ETQNHRF+Y EPM VES Q++CDLALRFGE EE MSRPFGV+LLIAG DE GPSLYY+DPSGTF Q +AKAIG+ SEGA ++LQE+Y+K LT+ E + +AL+ LKQVMEE +T NV++A + + +Y E+ VI L Sbjct: 47 VEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQTL 240
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.938e-62 Identity = 121/189 (64.02%), Postives = 151/189 (79.89%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 557 VEK TSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS+SEGA SSLQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 50 VEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 6.938e-62 Identity = 121/189 (64.02%), Postives = 151/189 (79.89%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 557 VEK TSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS+SEGA SSLQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 50 VEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.938e-62 Identity = 121/189 (64.02%), Postives = 151/189 (79.89%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 557 VEK TSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS+SEGA SSLQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 50 VEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.546e-61 Identity = 121/189 (64.02%), Postives = 150/189 (79.37%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 557 VEK TSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS+SEGA SSLQE Y+K TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI Sbjct: 50 VEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.709e-60 Identity = 114/192 (59.38%), Postives = 149/192 (77.60%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE---GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVINR 563 VEK TSPL+E SVEK+ EID HIGCA+SGL ADART++EHARV+TQNHRF+Y EP +ESTTQ++CDLALRFGE G+E MSRPFGV+LLIAG DE+GP LY+++PSGT+++ AKAIGS SE A S L ++++KD+TL+EAE + L +L+QVMEEK+ NV +A+V +H+Y E+ + R Sbjct: 50 VEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVAR 241 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |