FC925349

Overview
NameFC925349
Unique NameFC925349
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length497
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig790 contig Ccv1_Contig790:641..1137. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.320e-47
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 2
Query:    2 KEILLKMK------VKAGFCTSALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKE 274
            +EIL KMK      V  G   S+ D+GKGKSKM K ITHG+HLVKGK+ H MEDY+V++FK+  DNELGLFAIFDGHL H++ +YL +HLF+NILKE
Sbjct:    4 REILHKMKESVKEKVGLGASASSADSGKGKSKMLKQITHGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKE 100          

HSP 2 Score: 87.8113 bits (216), Expect = 1.320e-47
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 3
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            K+P+FW + E AI++AY++TDT IL++A  LGKGGSTAVTAILIN QKLVVANVGDSRA
Sbjct:   99 KEPNFWQEPEKAIKKAYYITDTTILDKADDLGKGGSTAVTAILINCQKLVVANVGDSRA 157          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.024e-45
Identity = 63/96 (65.62%), Postives = 79/96 (82.29%), Query Frame = 2
Query:    2 KEILLKMK--VKAGFCTSALDTGKGKSKMS-KLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            KEI  KMK  VK  F +S  +TGKGK+K+S K + HGYHLVKGKSNH MEDYLV+E++QE +++LGLFAIFDGHLGH V ++L++HLFDNILK+ E
Sbjct:    4 KEIYHKMKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQEGEHDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPE 99          

HSP 2 Score: 75.8702 bits (185), Expect = 2.024e-45
Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 3
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILI---NGQKLVVANVGDSRA 497
            KQP+F ++ ++AIR AY +TD KILE A  LG+GGSTAVTAILI   N   LVVANVGDSRA
Sbjct:   96 KQPEFLSNPQAAIRNAYQLTDAKILESAAELGRGGSTAVTAILISSENSVNLVVANVGDSRA 157          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.324e-37
Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 2
Query:   44 TSALDTGKGKSKMSK-LITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKE 274
            +S+ DTGKG+SK S   +THG+HLV+GKS H MEDY V+E+K +K +ELGLFAIFDGHLG  V +YL+ +LF NILKE
Sbjct:   52 SSSTDTGKGRSKQSSNKVTHGFHLVEGKSGHDMEDYHVAEYKYDKSHELGLFAIFDGHLGDSVPSYLKANLFCNILKE 129          

HSP 2 Score: 72.7886 bits (177), Expect = 1.324e-37
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 3
Query:  312 IFC---KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            +FC   K+P FWT+ + AI+ AY  T+  ILE A  LG GGSTAVTAI+++G+ + VANVGDSRA
Sbjct:  122 LFCNILKEPIFWTNPQEAIKNAYRSTNKYILENAKQLGPGGSTAVTAIVVDGKDMWVANVGDSRA 186          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.232e-33
Identity = 68/91 (74.73%), Postives = 80/91 (87.91%), Query Frame = 2
Query:    8 ILLKMKVKAGFCTSALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            IL K+K+KAGFC SA D G+GKSKM K ITHG+H VKGKS+H MEDY+VSEFK+ + +ELGLFAIFDGHLGHDVA YLQT+LFDNILKE++
Sbjct:    6 ILHKIKLKAGFCGSAPDMGRGKSKMWKNITHGFHCVKGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKD 96          

HSP 2 Score: 90.5077 bits (223), Expect = 4.518e-18
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  294 YLYT--FFIFCKQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            YL T  F    K+ DFWTDTE+AIR AY  TD  IL+Q+  LGKGGSTAVT ILI+G+KLVVANVGDSRA
Sbjct:   82 YLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGKGGSTAVTGILIDGKKLVVANVGDSRA 151          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.146e-32
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 2
Query:   47 SALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            S+  +GKG+S    +I +G+ LVKGK+NH MEDY V+ F   +D+ELGLFAI+DGH+G  V  YLQ  LF NILKE E
Sbjct:   18 SSSRSGKGRSDEG-MIKYGFSLVKGKANHPMEDYHVANFINIQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKEGE 94          

HSP 2 Score: 73.9442 bits (180), Expect = 1.146e-32
Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 3
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            K+ +FW D   +I +AY  TD  IL  +  LG+GGSTAVTAILING+KL +ANVGDSRA
Sbjct:   91 KEGEFWVDPRRSIAKAYEKTDQAILSNSSDLGRGGSTAVTAILINGRKLWIANVGDSRA 149          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.477e-32
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 2
Query:   47 SALDTGKGKSKMSKL-ITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            ++  +GKGK    ++ +++G++LV+G +NH MEDY V+E  +EK NELGLFAIFDGHLG  V  YLQ +LF NIL EEE
Sbjct:   18 ASTSSGKGKGIQGQVKVSYGFYLVRGMTNHPMEDYHVAELAEEKGNELGLFAIFDGHLGDTVPAYLQKNLFANILNEEE 96          

HSP 2 Score: 66.2402 bits (160), Expect = 9.477e-32
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  324 QPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            + +F T  + AI +AY  TD  IL     LG+GGSTAVTAIL+NG+KL VANVGDSRA
Sbjct:   94 EEEFLTQPDRAIIKAYEKTDQAILSHTPDLGQGGSTAVTAILLNGRKLWVANVGDSRA 151          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 4.816e-28
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 2
Query:    2 KEILLKMKVKAGFCTSALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            +EIL KMKV  G C S  DTG+GK+K+ K I HGY  VKGK+ H MEDY+VSEFK+   ++LGLFAIFDGHLGHDVA YLQT+LFDNILKE++
Sbjct:    4 REILHKMKV--GLCGS--DTGRGKTKVWKNIAHGYDFVKGKAGHPMEDYVVSEFKKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKD 92          

HSP 2 Score: 86.2705 bits (212), Expect = 8.521e-17
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 3
Query:  294 YLYT--FFIFCKQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            YL T  F    K+ DFWTDT++AIR AY  TD  ILEQ+  LGKGGSTAVT ILI+G+ LV+ANVGDSRA
Sbjct:   78 YLQTNLFDNILKEKDFWTDTKNAIRNAYISTDAVILEQSLKLGKGGSTAVTGILIDGKTLVIANVGDSRA 147          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.649e-26
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 3
Query:  324 QPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            QPDFW + + AI+RAY  TD  IL+   V  +GGSTAVTAI+I+G+K+VVANVGDSRA
Sbjct:   46 QPDFWRNPKKAIKRAYKSTDDYILQNV-VGPRGGSTAVTAIVIDGKKIVVANVGDSRA 102          

HSP 2 Score: 65.855 bits (159), Expect = 6.649e-26
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 2
Query:  137 MEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            MED++V++ K  K + LGL+AIFDGH G DVA+YLQ HLFDNIL + +
Sbjct:    1 MEDFIVADTKTVKGHNLGLYAIFDGHSGSDVADYLQNHLFDNILSQPD 48          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.459e-18
Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 2
Query:   47 SALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            ++  +GKG++   + I  GY LVKGK+NH MEDY VS+F +   NELGLFAI+DGHLG  V  YLQ HLF NILKEE+
Sbjct:   19 ASTSSGKGRNNDGE-IKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQ 95          
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.929e-17
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 2
Query:   56 DTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            ++GKG++     I +G+ L+KGKSNH+MEDY V++F     NELGLFAIFDGH G  VA YLQ HLF NILK+ E
Sbjct:   20 NSGKGRNGEGG-IKYGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKDGE 93          
The following BLAST results are available for this feature:
BLAST of FC925349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
P2C39_ARATH1.320e-4762.89Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C62_ORYSJ2.024e-4565.63Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C44_ORYSJ1.324e-3764.10Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C58_ARATH2.232e-3374.73Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C09_ARATH1.146e-3256.41Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C41_ORYSJ9.477e-3255.70Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C20_ARATH4.816e-2867.74Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C28_ARATH6.649e-2663.79Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C10_ARATH3.459e-1858.97Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C17_ARATH2.929e-1758.67Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG15FM1 TF Citrus clementina cDNA clone KN0AAP3YG15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925349 ID=FC925349; Name=FC925349; organism=Citrus clementina; type=EST; length=497bp
CAAAGAAATTCTCCTGAAGATGAAGGTTAAGGCTGGGTTTTGTACATCTG
CATTGGACACAGGGAAAGGTAAAAGCAAAATGTCGAAACTTATCACGCAT
GGATATCATCTAGTGAAGGGAAAATCAAACCATGCCATGGAAGATTATCT
CGTTTCAGAATTCAAGCAAGAAAAAGACAATGAGCTGGGCTTATTTGCCA
TATTTGATGGCCATTTGGGCCATGATGTAGCAAATTACTTGCAAACTCAC
CTGTTTGATAATATTTTGAAAGAGGAGGAACATTGTGAATATATATCTAT
ATACTTTCTTTATTTTCTGCAAGCAGCCTGACTTTTGGACTGATACGGAA
AGTGCAATCAGGAGAGCTTATCATATGACAGACACTAAGATATTGGAGCA
AGCATTTGTCCTGGGAAAAGGGGGATCAACAGCAGTAACAGCAATTCTTA
TTAATGGTCAGAAACTAGTAGTTGCAAATGTGGGAGATTCTCGGGCT
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