FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.782e-34
Identity = 66/87 (75.86%), Postives = 80/87 (91.95%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED +VKKKVEAKN LENYAY+MRNT+KD+K+ GKL+  +KQKIEKAV++ ++WL+GNQ+AEVDEFEDK KELEG+CNPIIAKMYQ
Sbjct:  531 KAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQ 617          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.186e-34
Identity = 68/87 (78.16%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED +VKKKVEAKN LENYAY+MRNT+KDDK+ GKL A DK+KIE AV+E +EWL+ NQLAEVDE EDKLKELEGLCNPIIA++YQ
Sbjct:  534 KAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQ 620          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.574e-33
Identity = 65/87 (74.71%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED ++KKKVEAKN LENYAY+MRNTVKD+K+  KL++ DK+KIE AVD+ + WL+ NQLAEVDEFEDK+KELEG+CNPIIAKMYQ
Sbjct:  534 KAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQ 620          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 3.361e-33
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            KAED +VKKKV+AKN LENYAY+MRNT+KDDK+A KL A DK+KIE AVD  + WLD NQLAEV+EFEDK+KELEG+CNPIIAKMY
Sbjct:  528 KAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMY 613          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.489e-33
Identity = 63/87 (72.41%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED ++KKKVEAKN LENYAY+MRNT+KDDK+  +L+AADK++IE A+DE ++WLD NQLAE DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  532 KSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQ 618          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.339e-32
Identity = 62/87 (71.26%), Postives = 77/87 (88.51%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED + KKKVEAKN LENYAY+MRNT+KD+K+A KL+A D+ KIE A+++ ++WLDGNQLAE +EFEDK+KELE LCNPIIAKMYQ
Sbjct:  532 KSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQ 618          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 1.412e-31
Identity = 61/87 (70.11%), Postives = 77/87 (88.51%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED + KKKVE+KN LENYAY+MRN VKD+K+  KL+ ADK+KIE+A+D +++WLDGNQLAE DEF+DK+KELE +CNPIIAKMYQ
Sbjct:  532 KSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQ 618          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.845e-31
Identity = 60/87 (68.97%), Postives = 76/87 (87.36%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED + KKKVEAKN LENYAY+MRNT++D+K+  KL AADK+K+E +++E ++WLDGNQL E DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  532 KSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQ 618          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 3.146e-31
Identity = 60/87 (68.97%), Postives = 77/87 (88.51%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED + KKKVEAKN LENYAY+MRNT++D+K+  KL AADK+KIE ++++ ++WL+GNQLAE DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  532 KSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQ 618          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.322e-29
Identity = 58/87 (66.67%), Postives = 74/87 (85.06%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED + KKKV+AKN LENYAY+MRNT++D+K+  KLA  DK+KIE +++  +EWL+ NQLAE DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  532 KSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQ 618          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HSP70_SOYBN1.782e-3475.86Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA5.186e-3478.16Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP71_SOLLC2.574e-3374.71Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_MAIZE3.361e-3376.74Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP7C_PETHY7.489e-3372.41Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_SOLLC6.339e-3271.26Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7E_SPIOL1.412e-3170.11Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_ARATH1.845e-3168.97Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_ARATH3.146e-3168.97Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP73_ARATH1.322e-2966.67Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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