FC925417

Overview
NameFC925417
Unique NameFC925417
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length562
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK5_ARATH (Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.894e-30
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 2
Query:   41 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 325
            KLLIVT+G KGCRYYTK+FKGRVPG   KAVDTTGAGDSFV   L  L  D +++ DE +L+EAL FANACGA+  T++GAIPALPT   A KL+
Sbjct:  225 KLLIVTDGEKGCRYYTKKFKGRVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGAIPALPTPADAQKLM 319          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK_SOLTU (Fructokinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 2
Query:   23 LFPPNPKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 325
            L+ PN KLL+VT G KGC YYTK+F G V G   K VDTTGAGDSFV  +L  +  DQ +++DE RL+E L F+ ACGA+T T++GAIPALPT+  AL LL
Sbjct:  215 LWHPNLKLLLVTLGEKGCNYYTKKFHGSVGGFHVKTVDTTGAGDSFVGALLTKIVDDQAILEDEARLKEVLRFSCACGAITTTKKGAIPALPTESEALTLL 315          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLLC (Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 2
Query:   23 LFPPNPKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 325
            L+ PN KLL+VT G KGC YYTK+F G V G   K VDTTGAGDSFV  +L  +  DQ +++DE RL+E L F+ ACGA+T T++GAIPALPT   AL LL
Sbjct:  224 LWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLL 324          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK2_ARATH (Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.452e-27
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 2
Query:   23 LFPPNPKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 325
            L+ PN KLL+VT G  GCRYYTK+F G V      AVDTTGAGDSFV  +LN +  DQ+++++E RLR+ L FANACGA+T T++GAIPALPT   AL  L
Sbjct:  224 LWHPNLKLLLVTLGENGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPALPTDCEALSFL 324          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK1_ARATH (Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.202e-27
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 2
Query:   23 LFPPNPKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPT 301
            L+ PN KLL+VT G KGCRYYTK FKG V      AVDTTGAGDSFV  +LN +  D+++++DE RLR+ L FANACGA+T T++GAIPALP+
Sbjct:  222 LWHPNLKLLLVTLGEKGCRYYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKGAIPALPS 314          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLHA (Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.182e-27
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 2
Query:   23 LFPPNPKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 325
            L+ PN KLL+VT G KGC YYTK+F G V G   K VDTTGAGDSFV  +L  +  DQ ++ DE RL+E L F+ ACGA+T T++GAIPALPT   AL LL
Sbjct:  224 LWHPNLKLLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLL 324          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSJ (Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.134e-27
Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 2
Query:   41 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 337
            KLLIVT+G KGCRY+TK+FKG VPG     VDTTGAGD+FV  +L  +A D ++  +E +LREAL F+NACGA+  T++GAIPALPT   A +L+   A
Sbjct:  237 KLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKAA 335          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK2_ORYSI (Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 7.134e-27
Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 2
Query:   41 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA 337
            KLLIVT+G KGCRY+TK+FKG VPG     VDTTGAGD+FV  +L  +A D ++  +E +LREAL F+NACGA+  T++GAIPALPT   A +L+   A
Sbjct:  237 KLLIVTDGEKGCRYFTKDFKGSVPGFSVNTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVAVAQELISKAA 335          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK2_MAIZE (Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.317e-27
Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 2
Query:   41 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLL 325
            KLL+VT+G KGCRY+TK+FKG VPG K   VDTTGAGD+FV  +L  +A D ++  +E +LREAL F+NACGA+  T++GAIPALPT   A  L+
Sbjct:  237 KLLVVTDGDKGCRYFTKDFKGSVPGFKVDTVDTTGAGDAFVGSLLVNVAKDDSIFHNEEKLREALKFSNACGAICTTKKGAIPALPTVATAQDLI 331          
BLAST of FC925417 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.589e-26
Identity = 53/104 (50.96%), Postives = 77/104 (74.04%), Query Frame = 2
Query:   20 KLFPPNPKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT 331
            KL+ P  KLL+VT G +GC+YY ++F+G VP  K + VDTTGAGD+FV  +L  +  D + ++D+ +L EA+ FANACGA+T T++GAIP+LPT+   LKL+ +
Sbjct:  219 KLWRPTMKLLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMES 322          
The following BLAST results are available for this feature:
BLAST of FC925417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SCRK5_ARATH6.894e-3066.32Putative fructokinase-5 OS=Arabidopsis thaliana GN... [more]
SCRK_SOLTU2.452e-2759.41Fructokinase OS=Solanum tuberosum PE=2 SV=1[more]
SCRK2_SOLLC2.452e-2759.41Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=... [more]
SCRK2_ARATH2.452e-2759.41Probable fructokinase-2 OS=Arabidopsis thaliana GN... [more]
SCRK1_ARATH3.202e-2762.37Probable fructokinase-1 OS=Arabidopsis thaliana GN... [more]
SCRK2_SOLHA4.182e-2759.41Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=... [more]
SCRK2_ORYSJ7.134e-2757.58Fructokinase-2 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK2_ORYSI7.134e-2757.58Fructokinase-2 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK2_MAIZE9.317e-2758.95Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1[more]
SCRK1_ORYSJ1.589e-2650.96Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE02FM1 TF Citrus clementina cDNA clone KN0AAP11YE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925417 ID=FC925417; Name=FC925417; organism=Citrus clementina; type=EST; length=562bp
TGATAACCTGCTGTTAGAGAAGCTGTTTCCTCCTAATCCCAAGCTTTTGA
TTGTCACTGAAGGTTCAAAAGGTTGTAGATATTACACTAAGGAATTCAAA
GGCAGGGTTCCTGGTGTTAAAACGAAAGCTGTTGACACCACTGGTGCCGG
TGATTCATTTGTCAGTGGAATACTTAATTGCTTAGCTGCTGATCAAAACC
TGATCAAGGATGAGAATCGGTTAAGAGAAGCTTTACTTTTTGCAAATGCC
TGTGGTGCCCTCACGGTTACAGAGAGAGGTGCAATTCCTGCACTGCCTAC
AAAAGAAGCTGCGCTCAAACTCTTACACACTGTTGCAGCGTTGTAAATGC
ATCAAGCAGAAATTTAATGTTTCGTATTTTTCTTCTGTATCAAGTTGTAT
TTTGAGCTCTGTTTGGAGCACTTTGCTCTTTTTTCCCCTTCAGTTTAAGA
AAGTTGCATAGCCTATTTGCATTGAATAGTAGTGTTCTAGATGCTAGGAT
TATGATCAATAAAATTACTGAACCCAATTTATTCTGAAAAGGAAAAAAAA
AAAAAAAAAAAA
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