FC925430

Overview
NameFC925430
Unique NameFC925430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length440
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2344 contig Ccv1_Contig2344:172..611. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 9.868e-44
Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = 1
Query:   37 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            MSF K V  V +LHLLN C +              IPK  L+ AKR++   WM+GIRR+IH+NPELGY+E ETS+L+++ELDKMG+ YK+PVAVTGV+G++GTG  PFVALRADMD+LP+QEMVEWE+KSKIPG
Sbjct:    1 MSFCKLVSFVLILHLLNSCLIS-----CSSNDLSQIPKNFLSLAKREDFFDWMVGIRRRIHENPELGYEEVETSKLVKTELDKMGVSYKNPVAVTGVIGYVGTGHAPFVALRADMDALPIQEMVEWEHKSKIPG 129          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 1.289e-43
Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 1
Query:   37 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            MSF KWV  V +LHLLNP  +              IP K L  AKR +   WM+GIRR+IH+NPELGY+E ETS+L+R+EL+KMG+ YK+PVAVTGVVG++GTG  PFVALRADMD+L +QEMVEWE+KSK+PG
Sbjct:    1 MSFFKWVSFVLILHLLNPTLIS-----CSSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPG 129          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 8.091e-38
Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 1
Query:  142 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            I  KLL FAK  E+  WM+ IRRKIH+NPELGY+E ETS+LIRSEL+ +GIKY++PVA+TGV+G+IGTGEPPFVALRADMD+LP+QE VEWE+KSKI G
Sbjct:   34 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAG 132          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.168e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query:  139 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            D P  LL  AK  E  GWM+G+RR+IH+NPELGY+EF TS+L+R ELD +GI Y+HP AVTGVV  +GTG PPFVALRADMD+LP+QE VEWE+KSK+PG
Sbjct:   31 DDPAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPG 130          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.168e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query:  139 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            D P  LL  AK  E  GWM+G+RR+IH+NPELGY+EF TS+L+R ELD +GI Y+HP AVTGVV  +GTG PPFVALRADMD+LP+QE VEWE+KSK+PG
Sbjct:   31 DDPAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPG 130          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.292e-35
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 1
Query:  142 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            IP   L  AK  E+   M+ IRRKIH+NPELGY+EFETS+ IRSELD +G+KY+ PVA+TG++G+IGTGEPPFVALRADMD+LP+QE VEWE+KSK PG
Sbjct:   33 IPINFLELAKSPEVFDSMVRIRRKIHENPELGYEEFETSKFIRSELDLIGVKYRFPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKNPG 131          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 2.978e-32
Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 1
Query:   37 MSFSKWVFVVFVLHLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            M FS   FV+FV     P P+              + + +L+ AK  E   WM GIRRKIH+NPE G+QEF+TSQL+R ELD +G+KYK+PVA TGVV +IG+   P   LRADMD+LPLQE+VEWE KSK+ G
Sbjct:    1 MDFSGSFFVIFVTFFFLP-PLSSAGSYDSGSGLESLARGMLHSAKDPEFFEWMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQELVEWESKSKVDG 133          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.755e-30
Identity = 57/93 (61.29%), Postives = 75/93 (80.65%), Query Frame = 1
Query:  154 LLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKI 432
            +L+ A+R E   WM G+R  IH+ PEL ++E ETS+L+R+ELD MG+ Y+HPVA TGVV  +GTG PPFVALRADMD+LP+QE V+WE+KSK+
Sbjct:   50 VLDRARRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGTGRPPFVALRADMDALPMQEEVQWEHKSKV 142          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.383e-29
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 1
Query:  148 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            +++   A R E   W+  +RR+IH+ PEL Y+E ETS+L+R ELD MG+ ++HPVA TGVV  IGTG PP VALRADMD+LP+QE VEWE+KSK PG
Sbjct:   97 EEIAGMAGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQEAVEWEHKSKNPG 193          
BLAST of FC925430 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.812e-28
Identity = 54/96 (56.25%), Postives = 77/96 (80.21%), Query Frame = 1
Query:  151 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 438
            ++L    + + V W+  +RR IH+NPEL ++E+ETS+LIRSELD+MGI Y++P+A TG+  +IG+G PPFVA+RADMD+LP+QE VEWE+ SK+ G
Sbjct:   75 EILRLTYQPDNVAWLKRVRRTIHENPELAFEEYETSRLIRSELDRMGIMYRYPLAKTGIRAWIGSGGPPFVAVRADMDALPIQEAVEWEHISKVAG 170          
The following BLAST results are available for this feature:
BLAST of FC925430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ILL5_ARATH9.868e-4461.19IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL4_ARATH1.289e-4361.19IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH8.091e-3872.73IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ORYSJ1.168e-3668.00IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.168e-3668.00IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ARATH1.292e-3568.69IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILR1_ARATH2.978e-3252.24IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL2_ORYSJ4.755e-3061.29IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL6_ORYSJ1.383e-2959.79IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL6_ARATH5.812e-2856.25IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YJ11FM1 TF Citrus clementina cDNA clone KN0AAP8YJ11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925430 ID=FC925430; Name=FC925430; organism=Citrus clementina; type=EST; length=440bp
TTTTGTTCTTGGAAATCGAAACTTATGGGTGGAGCCATGAGTTTCTCGAA
GTGGGTCTTCGTAGTTTTTGTTCTTCATTTGCTCAATCCATGTCCTGTTA
GATTCTCGTATGGCTCTTCAAGCTCAAATGGGTTATCGGATATTCCAAAA
AAGTTGCTTAATTTTGCAAAAAGACAAGAGCTTGTTGGCTGGATGATTGG
TATCAGGAGAAAAATACATCAGAATCCAGAACTGGGCTATCAGGAATTTG
AGACTAGTCAGCTTATTAGATCAGAATTGGATAAAATGGGTATTAAATAC
AAACACCCGGTAGCAGTAACTGGTGTTGTTGGTTTTATTGGGACTGGTGA
GCCTCCTTTTGTTGCATTGAGAGCAGATATGGATTCTCTTCCTCTGCAGG
AAATGGTTGAGTGGGAGTACAAGAGTAAAATTCCTGGGAA
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