FC925442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: XYNB_PRUPE (Putative beta-D-xylosidase (Fragment) OS=Prunus persica PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 7.110e-44 Identity = 84/142 (59.15%), Postives = 105/142 (73.94%), Query Frame = 2 Query: 2 TTFALSLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDVKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQANL 427 TTFA +L+ P SVP+ TSL A N+T+ S +RV+H +CN L +HVDVKNTG M GTHTLLVF PP G W+ +KQL+GF K+H+ G+ + VR+ +HVCKHLSVVD+FGIRRIP+GEH L IGDL H +SLQ NL Sbjct: 316 TTFAHNLAHGPTLVSVPL-TSLKATANSTMLSKTVRVSHPDCNALSPLDVHVDVKNTGSMDGTHTLLVFTSPPDGKWASSKQLMGFHKIHIATGSEKRVRIAVHVCKHLSVVDRFGIRRIPLGEHKLQIGDLSHHVSLQTNL 456
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: BXL1_ARATH (Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.199e-36 Identity = 79/146 (54.11%), Postives = 101/146 (69.18%), Query Frame = 2 Query: 2 TTFALSLSKAP-NQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDVKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQANL 427 TTF SL+K+P Q SV ++ A SS++I+V+HTNCN + LHV+V NTG+ GTHT+ VFA+PP NKQLI F+KVHV AGA Q+V++D+ CKHL VVD++G RRIPMGEH LHIGDLKH+I +Q L Sbjct: 629 TTFTHSLAKSPLAQLSVSLSNLNSANTILNSSSHSIKVSHTNCNSFPKMPLHVEVSNTGEFDGTHTVFVFAEPPINGIKGLGVNKQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQPQL 774
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: BXL2_ARATH (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.216e-35 Identity = 72/145 (49.66%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 2 TTFALSLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDVKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQANLEGI 436 T F +++ AP +PIA +N T+S +IRV H C D +SLG+HV+V N G GTHT+LVF+ PP G W+P KQL+ F++VHV G + V+++IHVCK+LSVVD+ G RRIP+G+H +HIGD H++SLQA+ G+ Sbjct: 627 TRFTHNIADAPKV--IPIAVR---GRNGTVSGKSIRVTHARC-DRLSLGVHVEVTNVGSRDGTHTMLVFSAPPGGEWAPKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSLQASTLGV 765
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: BXL4_ARATH (Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.305e-21 Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 2 TTFALSLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLG-----LHVDVKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQ 418 T F+ +L KAP+ S+ + + + S +AI +C +A+S G +H+ V+N GD G HT+ +F PPA + SP K L+GF+K+ + VR + +CK LSVVD+ G R+I +G+H LH+GDLKHS+S++ Sbjct: 643 TKFSHTLVKAPSLVSLGLEENHVCRSSECQSLDAIG---PHCENAVSGGGSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIR 783
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: BXL3_ARATH (Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.884e-20 Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 2 TTFALSLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLG----LHVDVKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISL 415 T F L KAP S+ + + + S +AI +C +A+ G +H++VKNTGD AG+HT+ +F P + SP KQL+GF+K+ + VR +++VCK LSVVD+ G R+I +G H LH+G LKHS+++ Sbjct: 633 TKFDHQLIKAPRLVSLSLDENHPCRSSECQSLDAIG---PHCENAVEGGSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNI 771
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: BXL6_ARATH (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.070e-15 Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 122 NCNDAMSLGLHVDVKNTGDMAGTHTLLVFAK-PPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQ 418 N +++ + V V NTG++ G+H +++F+K PP + P KQLIG+ +VHV + + I CK LSV + G R IP+G H L +GDL+HS+S++ Sbjct: 692 NSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVGKRVIPLGSHVLFLGDLQHSLSVE 791
BLAST of FC925442 vs. ExPASy Swiss-Prot
Match: BXL5_ARATH (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12 Identity = 46/138 (33.33%), Postives = 69/138 (50.00%), Query Frame = 2 Query: 8 FALSLSKAPNQFSVPIATSLYAFKNTTI----SSNAIRVAHTNCNDAMSLGLHVDVKNTGDMAGTHTLLVFAKPP------AGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 391 F LS + V A S+ K I + ++ ++ NC+D + + + + VKN G +G+H +LVF KPP G P QL+GF++V V + +D VCK LS+VD G R++ G H L IG Sbjct: 622 FGYGLSYSSFSTFVLSAPSIIHIKTNPIMNLNKTTSVDISTVNCHD-LKIRIVIGVKNHGLRSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERVEVGRSMTEKFTVDFDVCKALSLVDTHGKRKLVTGHHKLVIG 758 The following BLAST results are available for this feature:
BLAST of FC925442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925442 ID=FC925442; Name=FC925442; organism=Citrus clementina; type=EST; length=524bpback to top |