FC925457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_ARATH (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana GN=At2g20490 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 9.960e-24 Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPPKY 238 MYLQ YIN+ G+KVYTTKKESP G+ +SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ P +Y Sbjct: 1 MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNAPLQY 64
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_DANRE (H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio GN=nop10 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.346e-20 Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPP 232 M+LQFY+N+NG++VYT KK P+G P SAHPARFSPDDK+SR RV +KKRFGLL TQ+P P Sbjct: 1 MFLQFYLNENGERVYTLKKVDPSGQPTSSAHPARFSPDDKFSRHRVTIKKRFGLLLTQQPRP 62
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_DROME (H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster GN=CG7637 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.681e-20 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPPKY 238 MYL + IN+NGD+VYT KK + G P SAHPARFSP+DKYSRQR+ +KKRFGLL TQKP P Y Sbjct: 1 MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLLTQKPEPIY 64
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_MOUSE (H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus GN=Nop10 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.393e-17 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPP 232 M+LQ+Y+N+ GD+VYT KK P G SAHPARFSPDDKYSR R+ +KKRF +L TQ+P P Sbjct: 1 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQPRP 62
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_HUMAN (H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens GN=NOP10 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.393e-17 Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPP 232 M+LQ+Y+N+ GD+VYT KK P G SAHPARFSPDDKYSR R+ +KKRF +L TQ+P P Sbjct: 1 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQPRP 62
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_SCHPO (H/ACA ribonucleoprotein complex subunit 3 OS=Schizosaccharomyces pombe GN=nop10 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.029e-17 Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPPKY 238 M+L +Y+ND G +VYT KK SP G +S+HPARFSPDDKYSRQR LKKRF +L TQ P Y Sbjct: 1 MHLMYYLNDEGKRVYTLKKVSPDGRVTKSSHPARFSPDDKYSRQRYTLKKRFHVLLTQLPAKPY 64
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_DICDI (H/ACA ribonucleoprotein complex subunit 3 OS=Dictyostelium discoideum GN=nop10 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.627e-16 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQKPPPKY 238 M+L +Y + +G +VYT KKESP SAHPARFS DDKYSR+R+ LKKRFGLL TQ+PP ++ Sbjct: 1 MHLMYYNDKDGQRVYTLKKESPNHEATYSAHPARFSVDDKYSRERIALKKRFGLLLTQQPPLEF 64
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_DEBHA (H/ACA ribonucleoprotein complex subunit 3 OS=Debaryomyces hansenii GN=NOP10 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQ 220 M+L + + +G +VYT K + G +SAHPARFSPDDKYSRQRV LKKRFGLLPTQ Sbjct: 1 MHLMYTLGPDGKRVYTLNKTTSDGEITKSAHPARFSPDDKYSRQRVTLKKRFGLLPTQ 58
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_CAEEL (Putative H/ACA ribonucleoprotein complex subunit 3-like protein OS=Caenorhabditis elegans GN=C25A1.6 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.104e-14 Identity = 32/59 (54.24%), Postives = 49/59 (83.05%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQK 223 M+L++++++N +VYT K+ +P+G +AHPARFSP+DK S+ R+++KKRFGLLPTQK Sbjct: 1 MFLRYFLDENQQRVYTLKRTAPSGEQTLTAHPARFSPEDKNSKYRIIIKKRFGLLPTQK 59
BLAST of FC925457 vs. ExPASy Swiss-Prot
Match: NOP10_YEAST (H/ACA ribonucleoprotein complex subunit 3 OS=Saccharomyces cerevisiae GN=NOP10 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.194e-14 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 47 MYLQFYINDNGDKVYTTKKESPTGMPAQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQ 220 M+L + + +G ++YT KK + +G +SAHPARFSPDDKYSRQRV LKKRFGL+P Q Sbjct: 1 MHLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRVTLKKRFGLVPGQ 58 The following BLAST results are available for this feature:
BLAST of FC925457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925457 ID=FC925457; Name=FC925457; organism=Citrus clementina; type=EST; length=344bpback to top |