FC925490

Overview
NameFC925490
Unique NameFC925490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1996 contig Ccv1_Contig1996:1..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 327.791 bits (839), Expect = 3.913e-89
Identity = 154/171 (90.06%), Postives = 161/171 (94.15%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHAR 513
            IS+ CSRYYRAPELIFGATEYT AIDMWS GCV+AELLLGQPLFPGESG+DQLVEIIKILGTPTREEI+CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRCTALEACAHPFFDDLRDPN  LPNGR LP LFNFTAQELAGAS ELRQRLIP H +
Sbjct:  296 ISYICSRYYRAPELIFGATEYTNAIDMWSGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAHCQ 466          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 3.313e-88
Identity = 153/171 (89.47%), Postives = 160/171 (93.57%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHAR 513
            IS+ CSRYYRAPELIFGATEYT AIDMWS GCV+AELLLGQPLFPGESG+DQLVEIIKILGTPTREEI+CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRCTALEACAHPFFDDLR PN  LPNGR LP LFNFTAQELAGAS ELRQRLIP H +
Sbjct:  292 ISYICSRYYRAPELIFGATEYTNAIDMWSGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRAPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAHCQ 462          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.444e-84
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYTT ID+WS GCVLAELLLGQPLFPGESGVDQLVEIIK+LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKR PPEA+DLVSRLLQYSP+LR TA+EA  HPFFD+LRDPNT LPNGR LP LFNF  QEL GAS EL  +LIP+HARK
Sbjct:  232 ISYICSRYYRAPELIFGATEYTTTIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRTPPEAVDLVSRLLQYSPNLRSTAMEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDHARK 403          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.440e-83
Identity = 147/172 (85.47%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYTTAID+WS GCVLAELLLGQPLFPGESGVDQLVEIIK+LGTPTREEIKCMNPNY EFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRCTALEA  H FFD+LRDPNT LPNGR LP LFNF A EL G S E   +L+PEHARK
Sbjct:  231 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYNEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDELRDPNTRLPNGRVLPPLFNFKAHELKGVSAENLLKLVPEHARK 402          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 4.191e-83
Identity = 143/172 (83.14%), Postives = 159/172 (92.44%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYT++ID+WS GCVLAELLLGQPLFPGE+ VDQLVEIIK+LGTPTREEI+CMNPNYT+F+FPQIKAHPWHK+FHKRMPPEA+DL SRLLQYSPSLRCTALEACAHPFF++LR+PN  LPNGRPLP LFNF  QEL+GAS EL  RLIPEH R+
Sbjct:  230 ISYICSRYYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGENSVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNF-KQELSGASPELINRLIPEHVRR 400          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.148e-83
Identity = 143/172 (83.14%), Postives = 157/172 (91.28%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYT +ID+WS GCVLAELLLGQPLFPGE+ VDQLVEIIK+LGTPTREEI+CMNPNYT+F+FPQIKAHPWHK+FHKRMPPEA+DL SRLLQYSPSLRCTALEACAHPFF++LR+PN  LPNGRPLP LFNF  QEL GAS EL  RLIPEH R+
Sbjct:  228 ISYICSRYYRAPELIFGATEYTASIDIWSAGCVLAELLLGQPLFPGENSVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNF-KQELGGASMELINRLIPEHVRR 398          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.080e-82
Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYTTAID+WS GCV+AELLLGQPLFPGESGVDQLVEIIK+LGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEA+DL+ R  QYSP+LRCTA+EAC HPFFD+LRDPN  LPNGRPLP LFNF  QEL+G   E   RL+PEHARK
Sbjct:  240 ISYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPNLRCTAVEACIHPFFDELRDPNARLPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARK 411          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 2.080e-82
Identity = 139/172 (80.81%), Postives = 154/172 (89.53%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            +S+ CSRYYRAPELIFGA+EYTTAID+WS GCV+AELLLGQPLFPGESGVDQLVEIIK+LGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEA+DL+ R  QYSP+LRCTALEAC HP FD+LRDPNT LPNGRPLP LFNF  QEL+G   E+  RL+PEHARK
Sbjct:  241 VSYICSRYYRAPELIFGASEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPNLRCTALEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARK 412          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.716e-82
Identity = 143/172 (83.14%), Postives = 154/172 (89.53%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYTTAID+WS GCVLAELLLGQPLFPGESGVDQLVEIIK+LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRC AL++  HPFFD+LRDPN  LPNGR LP LFNF   EL G   E+  +L+PEHARK
Sbjct:  231 ISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCAALDSLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARK 402          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 7.903e-82
Identity = 143/172 (83.14%), Postives = 153/172 (88.95%), Query Frame = 1
Query:    1 ISFFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 516
            IS+ CSRYYRAPELIFGATEYTTAID+WS GCVL ELLLGQPLFPGESGVDQLVEIIK+LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LR TALEA  HPF+DD+RDPNT LPNGR LP LFNF   EL G   E+  +L+P HARK
Sbjct:  232 ISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDDVRDPNTRLPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPHARK 403          
The following BLAST results are available for this feature:
BLAST of FC925490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KSG8_ARATH3.913e-8990.06Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA3.313e-8889.47Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG5_ARATH8.444e-8485.47Shaggy-related protein kinase epsilon OS=Arabidops... [more]
MSK1_TOBAC1.440e-8385.47Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
KSG6_ARATH4.191e-8383.14Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH7.148e-8383.14Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG4_ARATH2.080e-8281.40Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG10_ARATH2.080e-8280.81Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG3_ARATH2.716e-8283.14Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
MSK3_MEDSA7.903e-8283.14Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YJ02FM1 TF Citrus clementina cDNA clone KN0AAP3YJ02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925490 ID=FC925490; Name=FC925490; organism=Citrus clementina; type=EST; length=750bp
ATATCGTTTTTCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGG
GGCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCT
TGGCTGAGCTTCTTCTTGGACAGCCTTTATTTCCTGGGGAAAGTGGAGTT
GACCAGCTCGTCGAAATCATTAAGATTCTGGGAACACCAACAAGAGAAGA
AATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAAATTA
AAGCTCATCCATGGCATAAGATATTTCACAAACGAATGCCCCCTGAAGCA
CTGGATCTTGTCTCAAGGTTGCTTCAGTATTCACCAAGCCTACGATGCAC
TGCTTTGGAGGCATGTGCACACCCCTTCTTTGATGATTTGAGAGACCCCA
ATACTTGTTTGCCAAATGGGCGACCCCTACCTACTCTTTTCAATTTCACT
GCTCAAGAATTGGCTGGTGCCTCTAATGAATTGCGACAACGTCTTATCCC
GGAGCACGCAAGGAAATGATTTGATGACTGAGATGGATCCATATGCAATA
TAAATCAATTTTTGGATGCTTAGGTATGCCACAAGCCATTGTTGCCCTAC
AGGGCAACCGATTTTTTTCCCCTTCACCAATGAGTTGGTTCGTGGCTGGG
AGGCTGCTCAAGGATTTTTATGATGAATCCGCTGATGGGAGTGAGTTGTG
GATGGAAAAAGGTTTGACATTTATTTTCCAATTACCAATGTTTAATTTGT
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