FC926005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.022e-45 Identity = 101/187 (54.01%), Postives = 134/187 (71.66%), Query Frame = 1 Query: 106 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRN---TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFY 657 N+ V+D NM +SQ YP DV T IV GE +PKRR++K + +GG +KRKLT EQ +LEM FG+EHKLES+RKD+LAAELGLDPRQVAVWFQNRRAR K K++EE Y LK +H+NVVV+K RLESEV LKE+L AE+EI++++E +EG S N+P ++ ++ ++PF+ Sbjct: 2 NYTVDDQ--NMAFISQLYP-DVYTQ--IVQPVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANETPFF 182
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.833e-42 Identity = 96/194 (49.48%), Postives = 136/194 (70.10%), Query Frame = 1 Query: 106 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTN----------GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFY 657 N V+D+ N++L+SQ YP+ V TP +VPQQG +KP RR+++++ + GNG FR KRKL+ EQ +LE+ F ++HKLES+RKD+LA+ELGLDPRQVAVWFQNRRAR K K++E+ Y LK A+E VVEK RL+SEV LKE+L AE+EI+++++ +EG N+P ++ T +PF+ Sbjct: 3 NQNVDDH--NLLLISQLYPN-VYTP--LVPQQGGEAKPTRRRKRKSKSVVVAEEGENEGNGWFR---KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANHTTPFF 188
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.236e-39 Identity = 95/199 (47.74%), Postives = 123/199 (61.81%), Query Frame = 1 Query: 136 MVLLSQFYPSDVLTPTG--IVPQQ---GEPSKPKRRQRKRNTNGNGGFRA---------LKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATI-------PTDMDTVDSPFYPGPF 669 M+L SQ YP I+ Q GE SKP +R+RKR + G+ L+KRKLT EQ +LE FGNEHKLES RK+K+A ELGLDPRQVAVWFQNRRAR K KK+EE YA LK H+NVV+ + +LES++ L E+LS A+ EI+K+SE +E + N+ S+++ PTD + Y PF Sbjct: 11 MMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSVEANNAPTDFELAPETNYNIPF 209
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.178e-29 Identity = 70/158 (44.30%), Postives = 104/158 (65.82%), Query Frame = 1 Query: 121 DNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRK--RNTNGNGGFRAL-----KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 573 + + + + + + +L +G V QGE + +RR+R+ R G GG + KKR+L+ EQ E+LE+ F E KLE+ RK LA+ELGLDP+QVAVWFQNRRAR K+K +EE ++ LK AH+ ++ K LE+EV LKE+L VAE+E++++ Sbjct: 6 EKQQQQQMFASYVDASLLAASGEV--QGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.178e-29 Identity = 70/158 (44.30%), Postives = 104/158 (65.82%), Query Frame = 1 Query: 121 DNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRK--RNTNGNGGFRAL-----KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 573 + + + + + + +L +G V QGE + +RR+R+ R G GG + KKR+L+ EQ E+LE+ F E KLE+ RK LA+ELGLDP+QVAVWFQNRRAR K+K +EE ++ LK AH+ ++ K LE+EV LKE+L VAE+E++++ Sbjct: 6 EKQQQQQMFASYVDASLLAASGEV--QGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 202 GEPSKPKRRQRKRN--------TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMS 576 GE K ++R+R++ +GG KKR+L+ EQA LEM F E KLE+ RK +LAAELGLD +QVAVWFQNRRAR K+K +EE +A L++AH+ VV++ LE+E+ LKE+L+ E+E K++ Sbjct: 29 GEQKKARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLA 161
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 202 GEPSKPKRRQRKRN--------TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMS 576 GE K ++R+R++ +GG KKR+L+ EQA LEM F E KLE+ RK +LAAELGLD +QVAVWFQNRRAR K+K +EE +A L++AH+ VV++ LE+E+ LKE+L+ E+E K++ Sbjct: 29 GEQKKARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLA 161
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.576e-20 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 274 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKL 543 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E Y LK+ ++++V++ +L SEV +L EKL Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 274 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSP 651 KKR+LTAEQ ++LE F E+KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + LK A H ++ + RL ++V +L EKL E + SATI T VD P Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKE--------------TSPSSATITTAAQEVDQP 204
BLAST of FC926005 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 274 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSP 651 KKR+LTAEQ ++LE F E+KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + LK A H ++ + RL ++V +L EKL E + SATI T VD P Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKE--------------TSPSSATITTAAQEVDQP 204 The following BLAST results are available for this feature:
BLAST of FC926005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC926005 ID=FC926005; Name=FC926005; organism=Citrus clementina; type=EST; length=694bpback to top |