FC926010

Overview
NameFC926010
Unique NameFC926010
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9329 contig Ccv1_Contig9329:15..615. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926010 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.375e-12
Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 1
Query:  190 CNGKSSWPELVGVNGEIAAATIQIENPNVHAIIILKGTPVTPDFRCXXXXXXXXXXXXXXXXPRIG 387
            C GKSSWP LVGV G +A A I+ +NPNV A+I+ +GTPVT DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68          
The following BLAST results are available for this feature:
BLAST of FC926010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ITH5_CUCMA4.375e-1251.52Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP5YE18FM1 TF Citrus clementina cDNA clone KN0AAP5YE18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926010 ID=FC926010; Name=FC926010; organism=Citrus clementina; type=EST; length=601bp
GCCTTCAAAATCCTTTAAAATTTATCAACAATGAAGAACTCAGTACTAGC
ACTAGCATTCTTCGTCTTTCTCTTTGCCTTTGCTGCAAATCCATCTTTGG
CTGCTCGTCATGAGCCTTTAGTGCTTCATTCTGATGGCCAGGAGCTCCTC
ACGGCTACCAGCAATTGCGATATCGTAACTCCATTTGAGTGTAATGGCAA
GAGCTCATGGCCAGAACTGGTTGGTGTAAACGGGGAGATTGCTGCTGCTA
CGATACAGATAGAGAATCCTAATGTTCATGCAATCATAATACTTAAGGGA
ACTCCAGTTACACCAGATTTTCGTTGTGATCGGGTTCGAGTTGTGGTTGA
CAAATATGAGAAGGTGGTTCAAGTTCCTCGGATTGGCTGAACTTCGATGA
TTATCTGCAATCATCATGGCTGGATGGATGGTCAGGATTAACTGCTTGTT
TATAATCACTTAACTATGTATTACTAAAATAAATGAACAAGTAGTGTTGT
TTAATAAAGCATGCATGGATGTGCGTGATATCCAACAATCGCGTTCTACG
AATGAGTGTAATAATACAACTTTTATGTCTAAAAAAAAAAAAAAAAAAAA
A
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