FC926015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.408e-65 Identity = 131/154 (85.06%), Postives = 131/154 (85.06%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 525 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAA SPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV Sbjct: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.256e-34 Identity = 82/154 (53.25%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 MA +SQ NQ PCKTL+ NPP Q TSKPS+ P+ S+ +R+ A KS +S++ + R VL P E +EI LKKALVDSFYGTDRGL + +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL Sbjct: 1 MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRA-VLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWIL 153
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30 Identity = 75/156 (48.08%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXS---PKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 MASIS NQ PCKTL +++ TSK S LP++S + +S++ FT +P +A PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWIL 156
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.026e-29 Identity = 75/156 (48.08%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXS---PKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 MASIS NQ PCKTL +++ TSK S LP++S +S++ FT +P +A PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWIL 156
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 67/153 (43.79%), Postives = 88/153 (57.52%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 MA++ NQFPCKT Q+ +++ SKP P + V +S + SF + F +R R + + V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL Sbjct: 1 MATVQFFNQFPCKTRVQSSANSKPLSKP---PSSLVPMSALTRRPSFPPGE-FAVSRSDFRVRVIDAEDELDPETSEGGGSALLMAEEAIESVEETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWIL 149
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22 Identity = 66/157 (42.04%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPK---EVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 MA++ QFPCKTL+ + + + SK P +LP+NS+ + G + RP RA + K V E + LK++L DS YGTDRGL+ +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL Sbjct: 1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSINRRSEI---------GVSVHRPDFKIRATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWIL 148
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21 Identity = 65/154 (42.21%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 64 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 MA++ + QF C+T P+++ SKP L P+ S+ I R + +++ R + RA ++V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPTEAL LLN KWIL Sbjct: 1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRVFKVRATDTGEIGSALLAAEEAI---------EDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWIL 140
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18 Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 343 TEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 522 +E+ LK L ++ YGT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL Sbjct: 90 SEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWIL 149
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18 Identity = 59/150 (39.33%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 85 NQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRAR--PLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 525 +QF CKT + + F SK P +LP+N + ++ + F P R + + E + LK+ L S YGTDRGL+A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILV Sbjct: 9 SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFKVRASDVNDEWGPDSKGRGGDVDDEWGPEIGLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILV 158
BLAST of FC926015 vs. ExPASy Swiss-Prot
Match: PAP3_ORYSJ (Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 331 PKEVTEIDN-------LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 525 P V E DN LK+ LVD+ YG+D G A+SE R E++EL+TQLEA NPTP P +A LL WIL+ Sbjct: 133 PPPVPEEDNEEERREELKRCLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILI 204 The following BLAST results are available for this feature:
BLAST of FC926015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC926015 ID=FC926015; Name=FC926015; organism=Citrus clementina; type=EST; length=689bpback to top |