FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:102..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SPIOL (Glucose-6-phosphate isomerase, cytosolic OS=Spinacia oleracea GN=PGIC PE=2 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 3.099e-101
Identity = 183/223 (82.06%), Postives = 202/223 (90.58%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MA ST ICDT+ W++LK HV EIKKTHLRDLMSD DRC+SMMVEFDG+LLDYSRQNAT  TM KL+QLAEA+ L +KINQM+NGE INSTENRSVLHVALRA RDA IN DGKNVVP+VW+VLDKI++FSE IRSGSWVG TGK L +VVAVGIGGSFLGPLFVHTALQT+ EA ECA+GRQL+FLANVDPIDVAK+I+GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MAPSTLICDTDSWQNLKTHVAEIKKTHLRDLMSDADRCKSMMVEFDGLLLDYSRQNATHDTMSKLFQLAEASHLKDKINQMFNGEHINSTENRSVLHVALRASRDAVINGDGKNVVPDVWQVLDKIRDFSEKIRSGSWVGVTGKPLTNVVAVGIGGSFLGPLFVHTALQTESEAAECAKGRQLRFLANVDPIDVAKNISGLNPETTLVVVVSKTFTTAETMLN 223          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ARAGE (Glucose-6-phosphate isomerase, cytosolic OS=Arabis gemmifera GN=PGIC PE=3 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 9.017e-101
Identity = 181/224 (80.80%), Postives = 204/224 (91.07%), Query Frame = 2
Query:   41 MASSTPI-CDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MASST + CDTE WKDLK HV++IKKTHLRDLMSD +RCQSMM+EFDG+LLDYSRQ A ++TMDKL  LA+AAQL  KI++M+NGE INSTENRSVLHVALRAP+DA I +DGKNVVPEVW VLDKIKEFSE IRSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTD EA+E A+GRQL+FLAN+DP+DVA++I GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MASSTALFCDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRAPVETMDKLLNLAKAAQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGKNVVPEVWNVLDKIKEFSEKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLRFLANIDPVDVARNIKGLNPETTLVVVVSKTFTTAETMLN 224          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ARATH (Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=PGIC PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.538e-100
Identity = 180/224 (80.36%), Postives = 205/224 (91.52%), Query Frame = 2
Query:   41 MASSTP-ICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MASST  ICDTE WKDLK HV++IKKTHLRDLMSD +RCQSMM+EFDG+LLDYSRQ AT++TMDKL  LA+A+QL  KI++M+NGE INSTENRSVLHVALRAP+DA I +DG NVVPEVW VLDKIKEFS+ IRSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTD EA+E A+GRQL+FLAN+DP+DVA++I+GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MASSTALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATVETMDKLLNLAKASQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGMNVVPEVWNVLDKIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLRFLANIDPVDVARNISGLNPETTLVVVVSKTFTTAETMLN 224          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ARALP (Glucose-6-phosphate isomerase, cytosolic OS=Arabidopsis lyrata subsp. petraea GN=PGIC PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.440e-98
Identity = 179/224 (79.91%), Postives = 202/224 (90.18%), Query Frame = 2
Query:   41 MASSTP-ICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MASST  I DTE WKDLK HV++IKKTHLRDLM+D +RCQSMM+EFDG+LLDYSRQ A ++TMDKL  LA+AAQL  KI++M+NGE INSTENRSVLHVALRAP+DA I +DGKNVV EVW VLDKIKEFSE IRSGSWVGATGK LKDV+A+GIGGSFLGPLFVHTALQTD EA+E A+GRQL+FLAN+DP+DVA++I GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MASSTALISDTEAWKDLKGHVEDIKKTHLRDLMTDANRCQSMMMEFDGLLLDYSRQRAPVETMDKLLNLAKAAQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGKNVVQEVWNVLDKIKEFSEKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGRQLRFLANIDPVDVARNIIGLNPETTLVVVVSKTFTTAETMLN 224          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_OENME (Glucose-6-phosphate isomerase, cytosolic OS=Oenothera mexicana GN=PGIC PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.809e-94
Identity = 171/223 (76.68%), Postives = 199/223 (89.24%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MAS   I +TE WKDLK HV++IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LA+AA L  KI++MYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FSE +R+GSWVGATGK LKDV+AVGIGGSFLGPLFVHTALQTD EA + ARGR+L+FLANVDPID A++I+GL+PETTLVVVVSKTFTTAETMLN
Sbjct:    1 MASPALISETEAWKDLKAHVEDIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLDPETTLVVVVSKTFTTAETMLN 223          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI2_CLAXA (Glucose-6-phosphate isomerase, cytosolic 2 OS=Clarkia xantiana GN=PGIC2 PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.669e-94
Identity = 171/223 (76.68%), Postives = 199/223 (89.24%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MA+ + I +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LAEAA L  KI++MYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FSE +R+GSWVGATGK LKDV+AVGIGGSFLGPLFVHTALQTD EA + ARGR+L+FLANVDPID A++I+GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MATPSLISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTLVVVVSKTFTTAETMLN 223          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI1_CLAMI (Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia mildrediae GN=PGIC1 PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.669e-94
Identity = 171/223 (76.68%), Postives = 197/223 (88.34%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MAS   I +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A   T+ KLY+LA+AA L  KI++MYNG+ INSTENRSVLHVALRAPRD+AI SDGKNVVP+VW VLDKIK+FS+ +R+GSW+GATGK LKDV+AVGIGGSFLGPLFVHTALQTD EA + ARGR+L+FLANVDPIDVA++I+GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MASPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQAIPDTIKKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRDSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETMLN 223          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI2_CLALE (Glucose-6-phosphate isomerase, cytosolic 2A OS=Clarkia lewisii GN=PGIC2-A PE=3 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.792e-94
Identity = 171/223 (76.68%), Postives = 198/223 (88.79%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MA+   I +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LAEAA L  KI++MYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FSE +R+GSWVGATGK LKDV+AVGIGGSFLGPLFVHTALQTD EA + ARGR+L+FLANVDPID A++I+GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MATPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLAEAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSERVRNGSWVGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDAARNISGLNPETTLVVVVSKTFTTAETMLN 223          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI1_CLAAR (Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia arcuata GN=PGIC1 PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.068e-93
Identity = 169/223 (75.78%), Postives = 199/223 (89.24%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MAS   I +TE WKDLK H++ IK+THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T++KLY+LA+AA L  KI++MYNG+ INSTENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FS+ +R+GSW+GATGK LKDV+AVGIGGSFLGPLFVHTALQTD EA + ARGR+L+FLANVDPIDVA++I+GLNPE+TLVVVVSKTFTTAETMLN
Sbjct:    1 MASPALISETEAWKDLKAHLEGIKRTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASSDTINKLYKLADAAHLKQKIDRMYNGDHINSTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSDRVRNGSWIGATGKKLKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPESTLVVVVSKTFTTAETMLN 223          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI1_CLALE (Glucose-6-phosphate isomerase, cytosolic 1A OS=Clarkia lewisii GN=PGIC1-A PE=3 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.821e-93
Identity = 169/223 (75.78%), Postives = 198/223 (88.79%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMSDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            MAS   I +TE WKDLK H++ IK THLR+LM DT+RCQSMMVEFD I LDYSRQ A+  T+ KLY+LA+AA L  KI++MYNG+ IN+TENRSVLHVALRAPR++AI SDGKNVVP+VW VLDKIK+FS+++R+GSW+GATGK LKDV+AVGIGGSFLGPLFVHTALQTD EA + ARGR+L+FLANVDPIDVA++I+GLNPETTLVVVVSKTFTTAETMLN
Sbjct:    1 MASPALISETEAWKDLKAHLEGIKMTHLRELMGDTERCQSMMVEFDNIFLDYSRQQASPDTISKLYKLADAAHLKQKIDRMYNGDHINTTENRSVLHVALRAPRNSAICSDGKNVVPDVWNVLDKIKDFSDSVRNGSWIGATGKELKDVIAVGIGGSFLGPLFVHTALQTDPEASKNARGRELRFLANVDPIDVARNISGLNPETTLVVVVSKTFTTAETMLN 223          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_SPIOL3.099e-10182.06Glucose-6-phosphate isomerase, cytosolic OS=Spinac... [more]
G6PI_ARAGE9.017e-10180.80Glucose-6-phosphate isomerase, cytosolic OS=Arabis... [more]
G6PI_ARATH1.538e-10080.36Glucose-6-phosphate isomerase, cytosolic OS=Arabid... [more]
G6PI_ARALP1.440e-9879.91Glucose-6-phosphate isomerase, cytosolic OS=Arabid... [more]
G6PI_OENME2.809e-9476.68Glucose-6-phosphate isomerase, cytosolic OS=Oenoth... [more]
G6PI2_CLAXA3.669e-9476.68Glucose-6-phosphate isomerase, cytosolic 2 OS=Clar... [more]
G6PI1_CLAMI3.669e-9476.68Glucose-6-phosphate isomerase, cytosolic 1 OS=Clar... [more]
G6PI2_CLALE4.792e-9476.68Glucose-6-phosphate isomerase, cytosolic 2A OS=Cla... [more]
G6PI1_CLAAR1.068e-9375.78Glucose-6-phosphate isomerase, cytosolic 1 OS=Clar... [more]
G6PI1_CLALE1.821e-9375.78Glucose-6-phosphate isomerase, cytosolic 1A OS=Cla... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
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