FC926432

Overview
NameFC926432
Unique NameFC926432
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13842 contig Ccv1_Contig13842:12..601. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 2.932e-82
Identity = 138/176 (78.41%), Postives = 148/176 (84.09%), Query Frame = 2
Query:   62 LLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            LL LS     +FILTLVNNCP+ +WPAIQPNAGHPVLERGGF LHSLTHRSFPAP  HWSGRIWARTGC Y HGKF C TGDCG R+EC+GLGGA PATLAQF LHHGH D S+YGVSLVDGFN+P+TVTPHEGKGVCPVVGCRA+LL +CP  LQ RS  GHG VV CKS CEAF
Sbjct:   18 LLSLSQSTNPNFILTLVNNCPYTIWPAIQPNAGHPVLERGGFTLHSLTHRSFPAPNAHWSGRIWARTGCNYQHGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPLTVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAF 193          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.350e-39
Identity = 94/190 (49.47%), Postives = 115/190 (60.53%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAH-GKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            MAS + +F+ A +LLL  S+A AS ++   N C  PVWP IQP+AG  +L  GGF L +    S   P   WSGR W R GCT+   G+  C TGDCG  L CNG GG  PATLA+ +L     +L  Y VSLVDG+N+ M++ P +G G C   GC +DL   CP  LQVRS  G  RVVACKS C AF
Sbjct:    1 MASIN-LFLFAFLLLL--SHASASTVI-FYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPL-WSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP---ELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGK-RVVACKSACSAF 181          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.130e-33
Identity = 75/193 (38.86%), Postives = 107/193 (55.44%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYA----KASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEA 586
            MA+   + ++A +++ +++           L +VNNC   VWP +   AGHP  + GGF+L +    +   PA  WSGR+W R GC++ + G+ SC TGDCG  L CNG  GATPAT+ + +L    + +  Y VSLVDGFN P+++    G   C    C AD+   CP  L+VR     GRV  C+S C A
Sbjct:    1 MATPLLLVVNAILIMAITACGGGGGNGGIQLIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAG-WSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRD--REGRVAGCRSACRA 190          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.131e-32
Identity = 85/192 (44.27%), Postives = 105/192 (54.69%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            M S     +  T+ +L  S A A+ I T  NNCP  VWP        P L   GF L S   RS  AP+  WSGR W RT C T A GKF+C T DCG  ++ CNG G   PATL + ++  +G  D   Y VSLVDGFN+PM+V P  G G C    C A++   CP  LQV++    G V++CKS C AF
Sbjct:    2 MKSQVASLLGLTLAILFFSGAHAAKI-TFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSP-WSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDY--YDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKA--ADGSVISCKSACLAF 187          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.131e-32
Identity = 89/190 (46.84%), Postives = 102/190 (53.68%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGHRLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            MA+ S I I   ++ + S  A  +   TL NNCP  VW       G P L  GGF L     R   APA  WSGR WARTGC + A G   CVTGDCG  L CNG GG  P TLA+F+L  G      Y VSLVDG+NV + + P  G G C   GC +DL A CP  L+V        VVACKS CE F
Sbjct:    1 MANISSIHI-LFLVFITSGIAVMATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQLTAPAG-WSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNG-GGVPPVTLAEFTLV-GDGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMD---QNNVVACKSACERF 181          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.783e-32
Identity = 82/191 (42.93%), Postives = 102/191 (53.40%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            M  T  + +S ++ +L    A A+ I +  NNCP+ VWP    +   P L   GF L S        P   W+GR WARTGC T A GKF C T DC   ++ CNG G   PATLA+F++  G      Y VSLVDGFN+PM+VTP  G G C    C A++ A CP  LQ +     G VVAC S C  F
Sbjct:    1 MMKTLVVVLSLSLTILSFGGAHAATI-SFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVP-WNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQ-DFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKG--SDGSVVACLSACVKF 186          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.804e-31
Identity = 84/192 (43.75%), Postives = 105/192 (54.69%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSL-HHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            M S + +    T+ +L  S A A+ I T  N C + VWP        P L   GF L +   RS  AP+  WSGR + RT C T A GKF+C T DCG  ++ CNG G A PATL + ++  +G  D   Y VSLVDGFN+PM+V P  G G C    C AD+   CP  LQV+     G V+ACKS C AF
Sbjct:    2 MKSQAALLGLTTLAILFFSGAHAAKI-TFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSP-WSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDF--YDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKG--SDGSVIACKSACLAF 187          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.855e-31
Identity = 84/191 (43.98%), Postives = 102/191 (53.40%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGC-TYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            M  T    +S ++ LL    A A+  ++  NNCP+ VWPA   + G+P L   GF L S        P   WSGR WART C T A GKF C T DC   +L CNG  G  PATLA+F++  G      Y VSLVDGFN+PM+VTP  G G C +  C A++   CP  LQ       G VVAC S C  F
Sbjct:    1 MMKTLGAVLSLSLTLLSFGGAHAA-TMSFKNNCPYTVWPA---SFGNPQLSTTGFELASQASFQLDTPVP-WSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQ-DFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQ--KIGSDGSVVACLSACVKF 183          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.912e-29
Identity = 73/190 (38.42%), Postives = 96/190 (50.53%), Query Frame = 2
Query:   23 MASTSPIFISATILLLLSSYAKASFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTYAHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLHHGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEAF 589
            M  T  ++     L  LS    A   +T  NNCP  +WP    +   P L   GF L S    +    A  W GR WART CT   GKF+C T DC   ++ CNG G   PA+L + ++   +  +  Y VSLVDG+N+P++V    G G C    CRA++ A CP  LQV+       V+ACKS C AF
Sbjct:    1 MMKTLALYGLTLALFFLSGAHSAK--ITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAP-WKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIA-ANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKG--SDASVLACKSACTAF 184          
BLAST of FC926432 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.064e-27
Identity = 73/180 (40.56%), Postives = 93/180 (51.67%), Query Frame = 2
Query:   59 ILLLLSSYAKA-SFILTLVNNCPFPVWPAIQPNAGHPVLERGGFYLHSLTHRSFPAPAQHWSGRIWARTGCTY-AHGKFSCVTGDCGH-RLECNGLGGATPATLAQFSLH-HGHNDLSSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPQNLQVRSPPGHGRVVACKSGCEA 586
            +L+ LS +A   S   T  N CP  VWP      G P L   GF L S    S    A  WSGR W R+ C+  + GKF C TGDCG  ++ CNG G + PA+L + +L  +G  D   Y VSLVDGFN+P+ + P  G G C    C A++   CP  L  +     G V+ CKS C A
Sbjct:   10 VLVFLSEHAGVYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAP-WSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDF--YDVSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKG--SDGSVIGCKSACLA 184          
The following BLAST results are available for this feature:
BLAST of FC926432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
OLP1_SOLLC2.932e-8278.41Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH2.350e-3949.47Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLPH_ORYSJ1.130e-3338.86Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TP1A_MALDO2.131e-3244.27Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
PR5_ARATH2.131e-3246.84Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP_PRUAV2.783e-3242.93Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_PRUPE1.804e-3143.75Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP2_PRUPE6.855e-3143.98Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA4.912e-2938.42Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP1_PYRPY2.064e-2740.56Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YK21FM1 TF Citrus clementina cDNA clone KN0AAP13YK21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926432 ID=FC926432; Name=FC926432; organism=Citrus clementina; type=EST; length=590bp
TTAGTTTTTCTTATTAACGAAAATGGCCTCAACTTCGCCCATTTTCATTT
CAGCAACTATCCTTCTTCTCCTCAGCTCCTACGCCAAAGCAAGCTTCATA
CTGACCCTAGTCAACAACTGCCCCTTCCCCGTCTGGCCGGCCATCCAGCC
CAACGCCGGCCACCCAGTCCTCGAACGTGGCGGCTTCTATCTCCATAGCC
TCACCCACCGCTCCTTCCCCGCTCCGGCCCAGCACTGGTCGGGCCGGATC
TGGGCCAGAACCGGCTGCACCTACGCCCACGGCAAATTCTCCTGCGTCAC
GGGCGACTGCGGCCACCGCTTGGAATGCAACGGACTCGGCGGGGCGACTC
CAGCCACCCTGGCCCAGTTCAGCCTCCACCACGGCCACAACGACCTCTCC
TCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTCAC
CCCGCACGAGGGCAAGGGCGTCTGTCCGGTAGTGGGTTGTCGCGCTGACC
TGCTAGCCACGTGTCCTCAGAACCTGCAGGTGAGGTCACCGCCGGGTCAC
GGCCGCGTGGTGGCATGTAAGAGTGGGTGTGAGGCGTTTG
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