FC926435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC926435 vs. ExPASy Swiss-Prot
Match: SNR25_HUMAN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens GN=SNRNP25 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.047e-16 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 179 LTALLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFDVAVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISW 424 L ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V V+ SATV DLK AI++ V ++ G +HISW Sbjct: 8 LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISW 89 HSP 2 Score: 35.4242 bits (80), Expect = 5.047e-16 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 3 Query: 501 HVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 608 +VW Y L+ +KL ++ L+D G+RN +V F+ Sbjct: 91 YVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 126
BLAST of FC926435 vs. ExPASy Swiss-Prot
Match: SNR25_MOUSE (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus GN=Snrnp25 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.475e-15 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 188 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFDVAVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISW 424 ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V V+ +ATV DLK AI++ V ++ G +HISW Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISW 80 HSP 2 Score: 35.4242 bits (80), Expect = 2.475e-15 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 3 Query: 501 HVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 608 +VW Y L+ +KL ++ L+D G+RN +V F+ Sbjct: 82 YVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117
BLAST of FC926435 vs. ExPASy Swiss-Prot
Match: SNR25_BOVIN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus GN=SNRNP25 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.475e-15 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 188 LLDDPILADVPKKPTLSDVDTLISLEMGSAMRISILKLDGTSFDVAVMNSATVKDLKLAIKKKVNDMEQSNLGHRHISW 424 ++ DP+L D+P + TL +V++ I+LE G AM + + K+DG V V+ +ATV DLK AI++ V ++ G +HISW Sbjct: 2 VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISW 80 HSP 2 Score: 35.4242 bits (80), Expect = 2.475e-15 Identity = 13/36 (36.11%), Postives = 22/36 (61.11%), Query Frame = 3 Query: 501 HVWANYCLSHQNQKLLDENSALQDCGVRNNSQVQFV 608 +VW Y L+ +KL ++ L+D G+RN +V F+ Sbjct: 82 YVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEVSFI 117 The following BLAST results are available for this feature:
BLAST of FC926435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC926435 ID=FC926435; Name=FC926435; organism=Citrus clementina; type=EST; length=655bpback to top |