FC927898

Overview
NameFC927898
Unique NameFC927898
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig893 contig Ccv1_Contig893:72..592. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC927898 vs. ExPASy Swiss-Prot
Match: CDC25_ARATH (Dual specificity phosphatase Cdc25 OS=Arabidopsis thaliana GN=CDC25 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.968e-46
Identity = 85/109 (77.98%), Postives = 94/109 (86.24%), Query Frame = 2 
Query:    5 LKLRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKISDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 331
            L  RPNIA+IDVRD+ER+YDGHI GSLHY S SF DKIS L+Q V+ KDTLVFHCALSQVRGPTCA+RL NYLDE KEDTGI +I +LERGF GWEASGKPVCRC +VP
Sbjct:   32 LHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHCALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVP 140
The following BLAST results are available for this feature:
BLAST of FC927898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CDC25_ARATH1.968e-4677.98Dual specificity phosphatase Cdc25 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YJ01FM1 TF Citrus clementina cDNA clone KN0AAP9YJ01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC927898 ID=FC927898; Name=FC927898; organism=Citrus clementina; type=EST; length=521bp
CTCTCTGAAACTTCGTCCAAATATTGCCGTTATAGATGTCAGGGACGATG
AAAGGAGTTACGATGGGCATATAACAGGATCTCTGCACTACCCCAGTGAC
AGCTTCACTGATAAGATCTCTGATCTTATTCAAGAGGTCAGGGGCAAAGA
TACCCTTGTTTTTCACTGCGCTTTAAGCCAGGTTCGTGGCCCAACTTGCG
CCAAGAGGCTTGCTAATTATCTCGACGAGGTGAAAGAAGATACCGGGATA
AATAGCATTTTTGTCCTGGAACGTGGCTTCAAGGGCTGGGAAGCTTCTGG
GAAACCTGTTTGTCGCTGCACTGATGTTCCATTTTTCTCCGGAATTCATT
GGAGCAGTATTTCTCCTTCTTCATAGAAGATATTCACGCTGAGATCGTTG
CCACTGCATAGATCAAGACTAGTCTGGACAAATTTTTACCGTATTGTGAC
AAAACCATGATATTGTTGAAAAATACTTTGCCGCCATGACTGAAGCCGAT
TGTGACCATTTTGGTCAAGGA
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