FC928204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_CENCI (Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.008e-86 Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFV+LGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFET K Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_PEA (Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 3.426e-86 Identity = 152/160 (95.00%), Postives = 158/160 (98.75%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNS+KSFDNLNNWREEFLIQA+PSDP+NFPFVV+GNKID+DGGNSRVVSEKKARAWCA+KGNIPYFET K Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPFVVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.144e-84 Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQA+PSDP+NFPFVVLGNKIDVDGGNSRVVSEKKA+AWCASKGNIPYFET K Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.218e-83 Identity = 149/160 (93.12%), Postives = 155/160 (96.88%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQF+DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV+DVN MKSFDNLNNWREEFLIQASPSDP+NFPFVVLGNK+DVDGGNSRVVSEKKA+AWCASKGNIPYFET K Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_MESCR (Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 4.792e-80 Identity = 142/160 (88.75%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M SRRR LLK+IILGDSGVGKTSLMNQ+VNKKFSNQYKATIGADFLTKE+QFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSF++LN WREEFLIQASP+DPDNFPFV+LGNKIDVDGG+ RVVSEKKA+AWC SKGNIPYFET K Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPFVLLGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.303e-74 Identity = 132/160 (82.50%), Postives = 145/160 (90.62%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M RRRTLLKVI+LGD+GVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQIWDTAGQERFQSLGVAFYRGADCCVL YDVN MKSFD L+NW EEFL QA+P DP +FPF++LGNKID+DGGNSRVVSEKKA+ WCASKGNIPYFET K Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.303e-74 Identity = 133/160 (83.12%), Postives = 144/160 (90.00%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M RRRTLLKVI+LGDSGVGKTSLMNQYV+KKFS QYKATIGADF+TKE+Q +DRL TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD L NW EEFL QA+P DP FPF++LGNKID+DGGNSRVVSEKKA+ WCA+KGNIPYFET K Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7_ARATH (Ras-related protein Rab7 OS=Arabidopsis thaliana GN=RAB7 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 5.673e-73 Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M +RRRTLLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++L+NW EFL +ASP DP FPF++LGNK+D+DGGNSRVVSEKKAR WCA KGNI YFET K Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 6.935e-71 Identity = 124/160 (77.50%), Postives = 145/160 (90.62%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M +++R LLKVIILGDSGVGKTSLMNQYV KKF+ +YKATIGADFLTKE++ +D+ T+QIWDTAGQERFQSLG AFYRGADCCVLV+DVN+ KSFD+L+NWR+EF+IQA P DPDNFPF+VLGNKID +GG+SR VSEKKA+AWCASKG+IPYFET K Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPFMVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 5.871e-70 Identity = 125/160 (78.12%), Postives = 143/160 (89.38%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M ++++ LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE+ +DR+ T+QIWDTAGQERFQSLGVAFYRGADCCVL YDVN K+F+NL++WR+EFLIQA P DPDNFPFVVLGNKID++ N RVVS+K+A +WC SKGNIPYFET K Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAK 158 The following BLAST results are available for this feature:
BLAST of FC928204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928204 ID=FC928204; Name=FC928204; organism=Citrus clementina; type=EST; length=595bpback to top |