FC928208
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928208 vs. ExPASy Swiss-Prot
Match: PUS6_ARATH (RNA pseudourine synthase 6, chloroplastic OS=Arabidopsis thaliana GN=At4g21770 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69 Identity = 138/231 (59.74%), Postives = 170/231 (73.59%), Query Frame = 1 Query: 34 SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLS-FSSSNRNFVCESWKRHVFTHXXXXXXXXXXXPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVL-EYICRELNLPPLFVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAG 720 S T R+L APVSLLRTLAST + +++SN F SS + F C S + S+ GY EY+RL+PCP+ N PPR+EH+VV E ++ E+I ++L+LPPL+VADLI FGAV+YALVCPKPP TATPE++ +F+EVT PSVL KRSSIKGKTVREAQKTFR+TH +Q EAGTYLRVHVHPKR PRCY+IDWKSRI+AVT+S+V+LDKPAG Sbjct: 3 SPALTGGYRNLTAPVSLLRTLASTRVTTP--LFRSNKHSPRFISSPKRFTCLSLLK-----TDSQNQTTLSSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLIRFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAG 226
BLAST of FC928208 vs. ExPASy Swiss-Prot
Match: PUS6_ORYSJ (RNA pseudourine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0660400 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.215e-60 Identity = 109/157 (69.43%), Postives = 131/157 (83.44%), Query Frame = 1 Query: 247 PSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPA 717 P++ YP Y RLLPCP Q+ PPR+EHLV E +++I R L LPPL+VADLI FGAVYYALV P+PP A PE +R+F+EVT+PSVL +R SIKGKTVREAQKTFR+T +Q +EAGTYLRVHVHPKRFPRCY+IDWKSR+IAVT+++VVLDKPA Sbjct: 66 PATAAYPVYGRLLPCPLQDDPPRIEHLVAREDEVAVDFISRSLTLPPLYVADLIKFGAVYYALVAPQPPPHAAPEHVRIFREVTEPSVLCRRKSIKGKTVREAQKTFRVTDPNQRLEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDNYVVLDKPA 222 The following BLAST results are available for this feature:
BLAST of FC928208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928208 ID=FC928208; Name=FC928208; organism=Citrus clementina; type=EST; length=720bpback to top |