FC928218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928218 vs. ExPASy Swiss-Prot
Match: SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.157e-49 Identity = 115/229 (50.22%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 3 DIEEVSKQQAILRKKGGLGSFAELANDD---LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP--SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDA 665 DIE+V K+Q IL+K+G S ++ + DD SG + S + + SA + SRKR R L L + E D+ ++ +L +SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+ +V+E+SS++N + + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNSS+LVC+L+FDR+GELFA AGVNKKIK+FEC++ Sbjct: 351 DIEQVVKRQLILKKRGS--SLSDFSKDDHQYTSGQPLMSFQA-NEEPSAFLASRKRVRQGILALENGVEVDEE-----------SQGSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNS 565
BLAST of FC928218 vs. ExPASy Swiss-Prot
Match: SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.717e-45 Identity = 106/225 (47.11%), Postives = 143/225 (63.56%), Query Frame = 3 Query: 3 DIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVRH-SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDA 665 DI++V K+Q +L++KG D + + SRKR R + EE +D+ +++ L E +L +SSRLM+N KKLES YF TR R +K + +PL R+ S LS +GR+S E+SS++ SK+ ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGDLLNSS+LVC++ FDRDGE FA AGVNKKIK+FEC++ Sbjct: 322 DIDQVVKRQLVLQQKG-------------------------RDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSS-----EKSSMSQ-PSKDPINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECES 515
BLAST of FC928218 vs. ExPASy Swiss-Prot
Match: SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18 Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 267 SSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDA 665 + RLM N ++LE AYF R + + S ++ R+ K L + +R S N +++ ++G+ S + F EGLCK+ +SK + GDLLNS+ +VCSLSFD D E AAAG++KKIK+F+ +A Sbjct: 623 TDRLMSNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNA 747
BLAST of FC928218 vs. ExPASy Swiss-Prot
Match: SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 3 Query: 273 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFE 656 RL++N +LESAYF R P R +R + L N +++ + + E +S R G F +GLCKY +SK + L +L N+S+++CSL FDRD + FA AGV+KKIK++E Sbjct: 635 RLIRNINQLESAYFAARIDAHLPEARYRLRPDR--------DLLRNSDNTVAEVENSETWSSDDRVG---AFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYE 751
BLAST of FC928218 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 63/223 (28.25%), Postives = 104/223 (46.64%), Query Frame = 3 Query: 9 EEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLH-HLEECDDNL--DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPV-KPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFECDA 665 + S + +L GG S + + SGL LN+ S + + + ++ H H + D + D+Q N +G +L + R+ F L+ Y R + KP G+ ER + N S+EGYS G ++ F L + +S+LRV A++ GD+ +S+++V S+ FDRD +LFA AGV+++IKVF+ A Sbjct: 206 DRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSG---LALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQ-------------------QERDT--NFISREGYSCG-----LDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSA 399
BLAST of FC928218 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 222 QKHNLTGNEERSLFKSSRLMKNFKKLESAYF-LTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSHLVCSLSFDRDGELFAAAGVNKKIKVFE 656 +K L+G++ +SL +S+ M K++ + + L C L + QL+ + + N++S + +EGYS G + F L + +S+LRV A++ GD+ +S+++V S+ FDRD ELFA AGV++ IKVF+ Sbjct: 273 KKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECY--------LQKRRQLADQPNSKQE--NDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFD 399 The following BLAST results are available for this feature:
BLAST of FC928218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928218 ID=FC928218; Name=FC928218; organism=Citrus clementina; type=EST; length=665bpback to top |