FC928219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: RBM12_PONAB (RNA-binding protein 12 OS=Pongo abelii GN=RBM12 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 70 SPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 S PS KR + E + ++GLPF + ++ FFK I+ED I+IA P+GKATGE +VEF + + K A+C+ K +G+R++++ P T Sbjct: 411 SKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPIT 506
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: RBM12_MACMU (RNA-binding protein 12 OS=Macaca mulatta GN=RBM12 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 70 SPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 S PS KR + E + ++GLPF + ++ FFK I+ED I+IA P+GKATGE +VEF + + K A+C+ K +G+R++++ P T Sbjct: 411 SKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPIT 506
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: RBM12_HUMAN (RNA-binding protein 12 OS=Homo sapiens GN=RBM12 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 70 SPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 S PS KR + E + ++GLPF + ++ FFK I+ED I+IA P+GKATGE +VEF + + K A+C+ K +G+R++++ P T Sbjct: 411 SKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPIT 506
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: RBM12_MOUSE (RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 70 SPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 S PS KR + E + ++GLPF + ++ FFK I+ED I+IA P+GKATGE +VEF + + K A+C+ K +G+R++++ P T Sbjct: 411 SKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPIT 506
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: HNRPF_RAT (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus GN=Hnrnpf PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPSTPD 363 +++RGLPF K EIVQFF +I+ + I + P+GK TGEA+V+F S E A++A+ K K IG RY+E+F S+ + Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQE 189
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: HNRPF_MOUSE (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPSTPD 363 +++RGLPF K EIVQFF +I+ + I + P+GK TGEA+V+F S E A++A+ K K IG RY+E+F S+ + Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQE 189
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: HNRPF_MACFA (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPSTPD 363 +++RGLPF K EIVQFF +I+ + I + P+GK TGEA+V+F S E A++A+ K K IG RY+E+F S+ + Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQE 189
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: HNRPF_HUMAN (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPSTPD 363 +++RGLPF K EIVQFF +I+ + I + P+GK TGEA+V+F S E A++A+ K K IG RY+E+F S+ + Sbjct: 113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQE 189
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: HNRPF_BOVIN (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13 Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPSTPD 363 +++RGLPF K EI+QFF +I+ + I + P+GK TGEA+V+F S E A++A+ K K IG RY+E+F S+ + Sbjct: 113 VRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQE 189
BLAST of FC928219 vs. ExPASy Swiss-Prot
Match: HNRH3_HUMAN (Heterogeneous nuclear ribonucleoprotein H3 OS=Homo sapiens GN=HNRNPH3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF+ +I+ + I + G++TGEA+V+F S E A+ A+ K K IG RY+E+F S+ Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSS 92 The following BLAST results are available for this feature:
BLAST of FC928219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928219 ID=FC928219; Name=FC928219; organism=Citrus clementina; type=EST; length=681bpback to top |