FC928223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928223 vs. ExPASy Swiss-Prot
Match: ATG10_HUMAN (Autophagy-related protein 10 OS=Homo sapiens GN=ATG10 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.150e-18 Identity = 49/136 (36.03%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 365 GTSCFKEEE----PTDSATLVQNYDCDKHY-YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTGEWMKLLFLGDTTQKKNGVAIELYLVAWFSVV 757 G +C EE P D +++ + Y++HV+Y+ SY+VPVLYFRA G+PL L +I +G+ C L + W IT +EHP L +P++ LHPC T E+M + KN Y+ +W S+V Sbjct: 65 GQTCLPMEEAFELPLDDCEVIETAAASEVIKYEYHVLYSCSYQVPVLYFRASFLDGRPLTLKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTPVLKNSQKINKN----VNYITSWLSIV 196
BLAST of FC928223 vs. ExPASy Swiss-Prot
Match: ATG10_MOUSE (Autophagy-related protein 10 OS=Mus musculus GN=Atg10 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 443 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTGEWMKLLFLGDTTQKKNGVAIELYLVAWFSVV 757 +++HV+Y+ SY+VPVLYFRA G+PL L++I +G+ C L + W IT +EHP L +P++ LHPC T E+M + +N Y+ +W S+V Sbjct: 95 HEYHVLYSCSYQVPVLYFRASFLDGRPLALEDIWEGVHECYKPRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTAVLKNSQKINRN----VNYITSWLSLV 195
BLAST of FC928223 vs. ExPASy Swiss-Prot
Match: ATG10_DICDI (Autophagy-related protein 10 OS=Dictyostelium discoideum GN=atg10 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.304e-15 Identity = 61/217 (28.11%), Postives = 97/217 (44.70%), Query Frame = 2 Query: 152 LSLSEFSLAAHTLADKWKRFNPSFPSWSWVACRKQPWFGSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSC--FKEEEPT--DSATLV-----QNYDCDKHYYDFHVIYNASYRVPVLYFRAYCS-GGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTGEWMKLLFL-----GDTTQKKNGVAIELYLVAWFSVV 757 L+ +F A L KW P W W + + E++GY + + ++ + + + + F+E + T DS+T + N + + + F +IY+ SY+VPVLY + S PL +EI LP + +S +IT EHP L P Y+LHPC T MKL+ L D KK + YL++W S++ Sbjct: 2 LTSKDFRDQAINLIKKWNNIIDEIP-WQWNQINEL----NNESKGYFTTKRYHKINNNNNNNNNNNIENKNNNNIENFEEIKETIDDSSTTIIKSNNNNNENNIIIFQFDIIYSKSYQVPVLYLNGFSSFDSSPLSWNEIWNNLPLSNLDKNQQSTIPYITQVEHPILGNPCYQLHPCETDNLMKLILLKEKDYNDNNDKKEYFK-DYYLLSWLSII 212 The following BLAST results are available for this feature:
BLAST of FC928223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928223 ID=FC928223; Name=FC928223; organism=Citrus clementina; type=EST; length=758bpback to top |