FC928897

Overview
NameFC928897
Unique NameFC928897
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length498
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15011 contig Ccv1_Contig15011:1..498. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.011e-59
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 321
            VLVPNEVPGLQVFKDDRWIDAKYIPNAL+IHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ
Sbjct:  229 VLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 335          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.568e-48
Identity = 84/107 (78.50%), Postives = 97/107 (90.65%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 321
            VLVPNEVPGLQV+KD  W D KYIPNALI+HIGDQ+EI+SNGKYK+V HRTTVNK+KTRMSWPVFLEPP D  VGP+P+LV++ENP K+K KK+KDY+YCKLNKLPQ
Sbjct:  228 VLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDYAYCKLNKLPQ 334          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.609e-47
Identity = 83/107 (77.57%), Postives = 95/107 (88.79%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 321
            +LVPNEV GLQVFKD  W D KYIPNALI+HIGDQ+EILSNGKYK+V HRTTVNKDKTRMSWPVFLEPP++  VGP+P+L+ + NPPK+K KK+KDY YCKLNKLPQ
Sbjct:  242 ILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDYVYCKLNKLPQ 348          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.339e-46
Identity = 83/107 (77.57%), Postives = 93/107 (86.92%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 321
            +LVPNEV GLQV KDD W D KYIPNALIIHIGDQIEI+SNGKYK+V HRTTVNKDKTRMSWPVFLEPP + + GP+ +L+ DENP K+K KK+KDY YCKLNKLPQ
Sbjct:  231 ILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDENPAKFKTKKYKDYVYCKLNKLPQ 337          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 9.829e-45
Identity = 82/107 (76.64%), Postives = 92/107 (85.98%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 321
            +LVPN+V GLQ  KD RW D KYIPNAL+IHIGDQ+EI+SNGKY +VLHRTTVNKDKTR+SWPVFLEPPAD VVGP PQLV+  N PKYK KK+ DY YCK+NKLPQ
Sbjct:  231 ILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPKYKTKKYGDYVYCKINKLPQ 337          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.320e-44
Identity = 80/106 (75.47%), Postives = 93/106 (87.74%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLP 318
            +LVPNEVPGLQVFKDD W DA+YIP+A+I+HIGDQI  LSNG+YK VLHRTTV+K+KTRMSWPVFLEPP + +VGPLP+L  D+NPPK+K   FKDYSY KLNKLP
Sbjct:  229 LLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDNPPKFKPFAFKDYSYRKLNKLP 334          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.017e-41
Identity = 77/107 (71.96%), Postives = 90/107 (84.11%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 321
            +LVPNEV   QVFKD  W D  YIPNA+I+HIGDQ+EILSNGKYK+V HRTTVNK KTRMSWPVFLEP ++  VGP+P L+++ NPPK+K KK+KDY YCKLNKLPQ
Sbjct:  246 LLVPNEV---QVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFKTKKYKDYVYCKLNKLPQ 349          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.573e-34
Identity = 63/105 (60.00%), Postives = 86/105 (81.90%), Query Frame = 1
Query:    1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKL 315
            +++ NE+PGLQVFKDD WI+ +YIP+A+I++IGDQI +LSNGKYK VLH+TTV+K+KTRMSWPV + P  D VVGPLP+L  +++PPK+K   +KDY + K+  L
Sbjct:  183 LIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDYVHNKITFL 287          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.587e-26
Identity = 52/102 (50.98%), Postives = 75/102 (73.53%), Query Frame = 1
Query:    4 LVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV-GPLPQLVDDENPPKYKAKKFKDYSYCKL 306
            ++ N VPGLQ+F +D+W+ AK +PN++I+HIGD +EILSNGKYK++LHR  VNK+K R+SW VF EPP + +V  PLP+ V +  PP++  + F  +   KL
Sbjct:  247 ILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKL 348          
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.276e-25
Identity = 55/116 (47.41%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    4 LVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV-GPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ*IFHYEKNN 348
            ++ N VPGLQ+F + +W+ AK +P+++++HIGD +EILSNGKYK++LHR  VNK+K R+SW VF EPP D +V  PLP++V  E+P K+  + F  +   KL    Q     EKN+
Sbjct:  241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEKND 356          
The following BLAST results are available for this feature:
BLAST of FC928897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
FLS_CITUN7.011e-5999.07Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS_EUSGR5.568e-4878.50Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS_PETHY3.609e-4777.57Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_PETCR2.339e-4677.57Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS_MALDO9.829e-4576.64Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS1_ARATH8.320e-4475.47Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_SOLTU1.017e-4171.96Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS_MATIN1.573e-3460.00Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
LDOX_PERFR4.587e-2650.98Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_ARATH2.276e-2547.41Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BA07RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928897 ID=FC928897; Name=FC928897; organism=Citrus clementina; type=EST; length=498bp
GTTCTTGTGCCCAATGAAGTTCCTGGTCTGCAAGTCTTTAAGGACGACCG
TTGGATCGATGCCAAGTACATCCCGAACGCTCTCATCATCCACATCGGGG
ACCAGATCGAGATTCTGAGCAATGGCAAGTACAAAGCCGTGCTGCATAGA
ACCACTGTTAACAAGGACAAGACGAGAATGTCGTGGCCAGTTTTCTTGGA
GCCACCTGCGGATACGGTGGTGGGTCCCCTTCCTCAGCTGGTTGACGATG
AAAATCCTCCAAAGTACAAGGCCAAGAAGTTCAAGGATTACAGTTACTGT
AAACTTAACAAACTTCCTCAGTAGATTTTTCATTATGAGAAAAATAACAC
CAGTATCCGCTGGCCGCTCATGTTTGATCTCGTCACTGTACGTTAGCGAT
GCTTGTTTGTTGTTGCGATCTTGTTTCTGAAATGTAATCGCGGGTGTTAG
CAATAATAAATAATCCTTTCATTTTAAAAAAAAAAAAAAAAAAAAAAA
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