FC929010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PMP22_ARATH (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.827e-61 Identity = 116/172 (67.44%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 169 KKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 684 K LQ+YL QLQQHPLRTKAITAGVLS +SD+V+QKL+GI V+F +LGP HF H LDK FKGKKDT TVAKKV+LEQLT SP N+L+FMIYYGVV+E PW V+ +IKK YPTVQ T+WTF+PVVGWIN+ YVPL FRVI HSLVA WGIFL LRA Sbjct: 8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRA 179
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PX24C_DICDI (PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.022e-21 Identity = 60/172 (34.88%), Postives = 98/172 (56.98%), Query Frame = 1 Query: 187 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGV--VVEGRPWRDVKTKIKKD-YPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRALPK 693 Y+ +L+ P++TKA+T+ LS IS +VAQK ++G P H+ H+ILD++FK KD K++++QL +P+ N+ F Y V +++G+P + + K+ D +PT++ SW WP+ IN +VP RV+F +LV CWGI+L++ A K Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLIS-SPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF---YSVLAILDGKP-KSILFKLYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILATKK 182
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PXMP2_MOUSE (Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17 Identity = 52/185 (28.11%), Postives = 99/185 (53.51%), Query Frame = 1 Query: 133 RRNFSEEMGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKL-----TGIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 672 R E+GS+ K+ L QYL+ L+ +P+ TKA+++G+LSA+ +++AQ + +++G GP H+L+L ++ + ++V K+++L++L +P L+F ++EG+ K++ + +W W + +IN YVPLQFRV+F ++ A+ W +L Sbjct: 7 RLRVESELGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAPTFLLLFFFVMN-LLEGKNVSVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PXMP2_BOVIN (Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15 Identity = 51/181 (28.18%), Postives = 97/181 (53.59%), Query Frame = 1 Query: 154 MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXV-------LFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSP-WNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 672 +G + ++ L QYL L+ +P+ TKA T+G+LSA+ + +AQ + V ++G + GP HF +L++++ + + + K+++L++L +P + +L F++ +EG+ K+K + +W W V +IN Y+P+QFRV+F +LVA+ W +L Sbjct: 14 LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAPAFLSLFFLVMN--FLEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYL 191
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15 Identity = 54/172 (31.40%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 169 KKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT----GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 672 K YL QL ++P+ TKA+T+G L ISD + Q + +FG A GP H+ LDK F KK K+ ++Q+ SP N +F G++ EG+ D+ K+KKD+ T + WP + ++N Y+ RV F ++ + WG FL Sbjct: 9 KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGIL-EGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PXMP2_RAT (Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.585e-15 Identity = 51/185 (27.57%), Postives = 97/185 (52.43%), Query Frame = 1 Query: 133 RRNFSEEMGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKL-----TGIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 672 R E+ S+ K+ L QYL+ L+ +P+ TKA+++G+LSA+ +++AQ + +++G GP H+L+L ++ + + V K+++L++L +P L+F ++EG+ K++ + +W W + +IN YVPLQFRV+F ++ A+ W +L Sbjct: 7 RLRVESELRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAPTFLLLFFFVMN-LLEGKNISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.086e-13 Identity = 46/179 (25.70%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 154 MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQ------KLTGIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 672 +G++ ++ L QYL+ L+ +P+ TKA T+G+LSA+ + +AQ K ++G + GP HF + ++ + + + ++++L++L +P ++F + +EG+ K++ + +W W + +IN YVPL+FRV+F +L A+ W +L Sbjct: 14 LGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGL-RRLLLDRLVFAPAFLMLFFLIMN-FLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: MPV17_RAT (Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 49/169 (28.99%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 187 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 684 Y L HP + + +TAG L + DI++Q+L G+ GC ++GP + +LD + G + + KK++L+Q +P F+ GV+ G +D K+K+DYP T++ WP V N VPL +R+ VA+ W +L+ +A Sbjct: 7 YQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNAL-KKMLLDQGGFAPCFLGCFLPLVGVL-NGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKA 173
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: MPV17_MOUSE (Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13 Identity = 48/169 (28.40%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 187 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 684 Y L HP + + +TAG L + D+++Q+L G+ V GC ++GP + +LD + G + KK++L+Q +P F+ G++ G +D K+K+DYP T++ WP V N VPL +R+ VA+ W +L+ +A Sbjct: 7 YQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVGPVVGGWYKVLDHLIPGTTKVHAL-KKMLLDQGGFAPCFLGCFLPLVGIL-NGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLSWKA 173
BLAST of FC929010 vs. ExPASy Swiss-Prot
Match: MPV17_HUMAN (Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.389e-13 Identity = 48/169 (28.40%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 187 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFRHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 684 Y L HP + + +TAG L + DI++Q+L G+ V GC ++GP + +LD+ G + KK++L+Q +P F+ G + G +D K+++DYP T++ WP V N VPL +R+ VA+ W +L+ +A Sbjct: 7 YQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVGPVVGGWYKVLDRFIPGTTKVDAL-KKMLLDQGGFAPCFLGCFLPLVGAL-NGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKA 173 The following BLAST results are available for this feature:
BLAST of FC929010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929010 ID=FC929010; Name=FC929010; organism=Citrus clementina; type=EST; length=828bpback to top |