FC929026

Overview
NameFC929026
Unique NameFC929026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig155 contig Ccv1_Contig155:172..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFK-NDSVIAYHFPATSPTAEIVFTNEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIG+YLD   +  L  KWKGK    LA   DFF  +++ P EKF ++ +I  + G QY  ++      +      Y   +  A+EK ++ F+ + F   DS++  H P  S T       +  E S   +EN  + E + +  + G +GVSP
Sbjct:   47 VKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSP-ESLTISFGKAGDIPETSNAVIENKKLSEAVIESVI-GEKGVSP 200          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            IKFTAIGVYL+   +  L  KWKGK    L    DFF  +VS P EKF ++ +I  + G QY  ++             Y + E  A+EK +E F+ + F    S++    P  S T  I F+ +G   E   + +EN  + E + +  + G  GVSP
Sbjct:   49 IKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLT--IAFSKDGSLPETGTVVMENKQLSEAVLESII-GKHGVSP 203          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHL-QKWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            + FTAIGVYL+   +S L  KWKGK    LA + DFF  + + P EKF RI ++K + G QY  +++            Y E E +A+EK  E  +++ F   + I +    +  +  I F  EG   E     +E+  + E I +  + G  GVSP
Sbjct:   48 VVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESII-GKHGVSP 203          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHL-QKWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            I FTAIG+YL+ + +  L  KWKGK G  LA   DFF  + + P EKF  + +I  + G QY  ++             Y + E SA++K  + F+ + F    S++  H P  S T +I F+ +G   +D  + +EN  + + + +  + G  GVSP
Sbjct:   44 IAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTP--SGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESII-GEHGVSP 198          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            IKFTAIGVYL+ + ++ L  KWKGK    +A   DFF  +V+ P EKF ++  I  + G QY  ++            K+ + E+ A +K ++ F+++ F    S++    P  S T  I F+ +G   E     +EN  + E + +  + G +GVSP
Sbjct:   47 IKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLT--ISFSKDGSIPEKENAIIENKQLSEAVLESII-GKKGVSP 201          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 49/156 (31.41%), Postives = 74/156 (47.44%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+   L  L  KWK K    LA   DFF  +V+ P EKF R+ +I  + G QY  ++             Y + E  A+EK++  FQ++ F    S++    P  + T   +  +         +EN  + E + +  + G  GVSP
Sbjct:   42 VKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESII-GKHGVSP 196          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+   ++ L  KWKGK    L+   +FF  +++ P EKF ++ +I  + G QY  ++      +      Y + +  A+EK ++ FQ++ F   DS++  H P    +  I F   G   E S   +EN  + E + +  + G +GVSP
Sbjct:   49 VKFTAIGVYLEESGVAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQWKAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSP---ESLTISFGKNGAIPEVSNAVIENKKLSEAVIESII-GEKGVSP 202          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 51/164 (31.10%), Postives = 76/164 (46.34%), Query Frame = 2
Query:    2 IHFLQIKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 478
            IH   +KFTAI VYL  + LS L  KWK K    L + D FF  +V+ P EKF ++ +IK + G QY  ++             Y + E  A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:   41 IHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_SAUME (Chalcone--flavonone isomerase OS=Saussurea medusa GN=CHI PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 48/159 (30.19%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAE--IVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFT IGVYL+ + +  L  KWKGK  + L     F+  +V+ P EKF ++ +I  + G QY  ++             Y + + + +EK +E F+ + F   S I +    TSPT    I F+ +G   E + + +EN  + + + +  + G  GVSP
Sbjct:   47 VKFTGIGVYLEDKAIPSLAVKWKGKTAAELTDSVQFYRDIVTGPFEKFSQVTMILPLTGKQYSEKVSEMCIGVWKAQGTYTDADTATIEKFLEVFKDENFLPGSSILF---TTSPTGSLTISFSKDGNIPEAATVVLENRKLAQTVIESVI-GEHGVSP 201          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 50/164 (30.49%), Postives = 76/164 (46.34%), Query Frame = 2
Query:    2 IHFLQIKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 478
            IH   +KFTAI +YL  + LS L  KWK K    L + D FF  +V+ P EKF ++ +IK + G QY  ++             Y + E  A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:   41 IHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
The following BLAST results are available for this feature:
BLAST of FC929026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CFI_EUSGR1.057e-1332.05Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_CAMSI1.057e-1334.18Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_CANGE1.381e-1333.12Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_ALLCE5.246e-1332.28Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]
CFI_VERHY6.852e-1332.28Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI_TOBAC6.852e-1331.41Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI_GENTR1.169e-1231.65Chalcone--flavonone isomerase OS=Gentiana triflora... [more]
CFI3_SOYBN4.441e-1231.10Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI_SAUME5.801e-1230.19Chalcone--flavonone isomerase OS=Saussurea medusa ... [more]
CFI2A_SOYBN5.801e-1230.49Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DB07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DB07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929026 ID=FC929026; Name=FC929026; organism=Citrus clementina; type=EST; length=697bp
GATACACTTTCTCCAAATCAAGTTCACGGCAATTGGAGTCTACTTGGATC
CTGAAATTTTGAGTCACTTGCAAAAGTGGAAGGGCAAACAGGGAAGTTCC
CTTGCACAACATGATGACTTCTTTGATGCTCTTGTCTCTGCTCCAGTAGA
GAAATTTTTTAGAATTGTTGTGATCAAGGAGATCAAGGGGTCACAATATG
GGGTTCAGTTAAAAGGTGCGGTGAGGGACAGATTGGCCGAAACTGACAAA
TATGAAGAATAGGAAGAATCTGCCCTTGAGAAAATCGTTGAATTCTTCCA
ATCCAAGTATTTTAAAAATGACTCTGTGATTGCTTATCATTTTCCAGCAA
CATCCCCTACTGCAGAGATAGTGTTTACAAATGAAGGAAAGGAGGACTCA
AAAATCAAAGTGGAGAATGCGAATGTGGTTGAGATGATCAAGAAATGGTA
CTTGGGTGGAGCAAGGGGAGTGTCTCCTACAACAACATCATCTCTAGCCA
ATACTCTCTCAGCTGAGTTATCAAAATGAAGCAGCTCTGCGCTTTCTAAT
AAAAGTGCTTCTTCACTTGGGTTTTGGAATTGCTGTACATTTGTGGAATT
TGAATGACGTGTTTACCCCGCATCCATGCTTCTATTTTAATGAAAATTTG
CTTTGCTAAAGTCCTTCACGAAAAAAAAAAAAAAAAAAAAAAAAAAA
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