FC929216

Overview
NameFC929216
Unique NameFC929216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length429
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..429. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 1.182e-62
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            TMLLGAAK+L+EH EEL+GTVVLVFQPAEEGGGGA K++EAGVLE V+AIFGLHV   L +G+V+SR GP+LAGSGFF+A I GKGGHAA+PQH+IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF+GGGAFNVIPDS
Sbjct:  141 TMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDS 282          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.804e-61
Identity = 115/143 (80.42%), Postives = 129/143 (90.21%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            V MLLG+A+ILQEHR+ELKGTVVLVFQPAEEGGGGA K+++ G +E + AIFG+HV   +PIG VASRPGP++AGSGFFEAVI GKGGHAA+P H+IDPILAASNVIVSLQ LVSREADPLDSQVVTV KFQGGGAFNVIPDS
Sbjct:  141 VAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDS 283          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.804e-61
Identity = 115/143 (80.42%), Postives = 129/143 (90.21%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            V MLLG+A+ILQEHR+ELKGTVVLVFQPAEEGGGGA K+++ G +E + AIFG+HV   +PIG VASRPGP++AGSGFFEAVI GKGGHAA+P H+IDPILAASNVIVSLQ LVSREADPLDSQVVTV KFQGGGAFNVIPDS
Sbjct:  141 VAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDS 283          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.829e-55
Identity = 107/142 (75.35%), Postives = 125/142 (88.03%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            TMLLGAAK+L+EH+EEL+GTV+LVFQPAEEGG GA K++EAGVLE V AIFGLHV   L +G+++SR G L+AGSG F+A I GKGGHAA+PQ +IDP+LAASNVI+SLQHLVSREADPLDSQVVTVA F+G  AFNVIPDS
Sbjct:  141 TMLLGAAKLLKEHQEELQGTVILVFQPAEEGGAGAKKIVEAGVLENVGAIFGLHVSNLLGLGQLSSREGLLMAGSGRFKATISGKGGHAALPQFAIDPVLAASNVILSLQHLVSREADPLDSQVVTVATFEGSDAFNVIPDS 282          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.227e-51
Identity = 99/143 (69.23%), Postives = 117/143 (81.82%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            VTMLLGAAKIL EHR  L+GTVVL+FQPAEEG  GA K+ E G L+ V AIFG+H+   +P G+ ASR G  LAG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQ LVSRE DPLDS+VVTV+K  GG AFNVIPDS
Sbjct:  143 VTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDS 285          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.313e-50
Identity = 96/143 (67.13%), Postives = 115/143 (80.42%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            V MLLGAAKILQ+HR+ L+GTVVL+FQPAEEG  GA  + E G L+ V AIFG+H+ P  P G+ AS  G  +AG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQHLVSRE DP DS+VVTV K  GG AFNVIPDS
Sbjct:  142 VAMLLGAAKILQQHRQHLQGTVVLIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTPFGKAASLAGSFMAGAGAFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQHLVSRETDPSDSKVVTVTKVNGGNAFNVIPDS 284          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.340e-49
Identity = 98/142 (69.01%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            TMLLGAA+ILQE R EL+GTVVL+FQP EE G GA +++EAG ++ V AIFG HV   LP G V SRPGPLLAG GFFEAVI GKGGHAA P  S+DPILAAS V+++LQ LVSREADPL++QVVTV +F  G A NVIP+S
Sbjct:  156 TMLLGAARILQERRHELQGTVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFEAVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGDALNVIPES 297          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.006e-45
Identity = 85/143 (59.44%), Postives = 113/143 (79.02%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            VTMLLGAAK+LQ  ++ELKGT+ LVFQPAEEG  GA+ VLE+G+L+ V+ IFGLHV PNLP+G VASRPGP ++ +  F A   GKGGHA +P  ++DP++A S+ ++SLQ LVSRE DPL++ VV++   +GG A+NVIP+S
Sbjct:  151 VTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPES 293          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.006e-45
Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            TMLLGAAK+LQ  +++LKGTV LVFQPAEEG  GA  VL+ GVL+ V+AIFGLHVDP + +G V SRPGP LA SG F A I GKGGHAA P +++DPIL AS+ IVSLQ +V+RE DPL++ V++V   +GG A+NVIP+S
Sbjct:  163 TMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDPLEAAVISVTFMKGGDAYNVIPES 304          
BLAST of FC929216 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 3.822e-45
Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 429
            MLLGAAK+LQ+ + ELKGTV LVFQPAEEG  GA+ VL+ GVL+ V+A+FG+HVDP LP+G VA+RPGP  A SG F A I GKGGHAA P  +IDP++AASN I+SLQ +V+RE DPL   VV++   +GG A+NVIP S
Sbjct:  149 MLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRFLATITGKGGHAAFPHDAIDPVVAASNAILSLQQIVAREIDPLQGAVVSITFVKGGEAYNVIPQS 289          
The following BLAST results are available for this feature:
BLAST of FC929216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
ILL4_ARATH1.182e-6283.10IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL1_ORYSJ3.804e-6180.42IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI3.804e-6180.42IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL5_ARATH1.829e-5575.35IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL2_ARATH1.227e-5169.23IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ARATH2.313e-5067.13IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL2_ORYSJ3.340e-4969.01IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL8_ORYSJ1.006e-4559.44IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL7_ORYSJ1.006e-4563.38IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL9_ORYSJ3.822e-4563.12IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA08RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929216 ID=FC929216; Name=FC929216; organism=Citrus clementina; type=EST; length=429bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCA
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