FC929219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929219 vs. ExPASy Swiss-Prot
Match: CLCF_ARATH (Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F PE=2 SV=2) HSP 1 Score: 266.544 bits (680), Expect = 9.761e-71 Identity = 146/239 (61.09%), Postives = 168/239 (70.29%), Query Frame = 1 Query: 1 VGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANQAKETDASDKRTLARGYSSLSPMEDKNEVLWRRTDGADELELSVVEN-XXXXXXXXXXXXXXXKVSRAMSKEFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSSIC 714 VGGLYAPSLMI EIIN AIPGN AVA+PQAYALVGMAATLAS+CSVPLTSVLLLFELT+DYRILLPLMGAVGLAIWVPSVANQ KE+D+S+ R+ RGYSSLSP E K E +WR TD AD LEL+V+EN KV R MSK +VKV+ TL+EA +K+ QNC++VV+ +DFL GILT+GDI+R L S S D NTC VSS+C Sbjct: 459 VGGLYAPSLMIGAAVGAVFGGSAAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQGKESDSSEGRSTGRGYSSLSPSERKTEGVWRHTDNADSLELTVIENPDHNSFLDEETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRYL-------SNNASTILDENTCPVSSVC 690
BLAST of FC929219 vs. ExPASy Swiss-Prot
Match: CLCE_ARATH (Chloride channel protein CLC-e OS=Arabidopsis thaliana GN=CLC-E PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.149e-29 Identity = 91/248 (36.69%), Postives = 130/248 (52.42%), Query Frame = 1 Query: 1 VGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGN-------VAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLMGAVGLAIWV---PSVANQAKETDASDKRTLARGYSSLSPMEDKNEVLWRRTDGADELELSVVENXXXXXXXXXXXXXXXKVSRAMSKEFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSSIC 714 VGG YAPSL I + I A+ N + VA PQAY LVGMAATLA VC VPLT+VLLLFELT+DYRI+LPL+GAVG++ W+ S + +ET + KR SL+ +D++ T+ E+E S+ + VS AM F V ++ +L+EA+ M +Q+C L+V+ ++ GILT DI+ + S +G++ D+ V+ IC Sbjct: 405 VGGYYAPSLFIGGAAGMAYG----KFIGLALAQNPDFNLSILEVASPQAYGLVGMAATLAGVCQVPLTAVLLLFELTQDYRIVLPLLGAVGMSSWITSGQSKRQETRETKETRKRKSQEAVQSLTSSDDESS-----TNNLCEVESSLCLDDSLNQSEELPKSIF--VSEAMRTRFATVMMSTSLEEALTRMLIEKQSCALIVDPDNIFLGILTLSDIQ----EFSKARKEGNNRPKDI---FVNDIC 634 The following BLAST results are available for this feature:
BLAST of FC929219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929219 ID=FC929219; Name=FC929219; organism=Citrus clementina; type=EST; length=714bpback to top |