FC929220

Overview
NameFC929220
Unique NameFC929220
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length466
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9282 contig Ccv1_Contig9282:1..466. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 3.082e-68
Identity = 128/153 (83.66%), Postives = 142/153 (92.81%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            TMLLGAAK+L+EH EEL+GTVVLVFQPAEEGGGGA K++EAGVLE V+AIFGLHV   L +G+V+SR GP+LAGSGFF+A I GKGGHAA+PQH+IDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF+GGGAFNVIPDSV IGGTFRAFS
Sbjct:  141 TMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDSVTIGGTFRAFS 293          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.295e-66
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            V MLLG+A+ILQEHR+ELKGTVVLVFQPAEEGGGGA K+++ G +E + AIFG+HV   +PIG VASRPGP++AGSGFFEAVI GKGGHAA+P H+IDPILAASNVIVSLQ LVSREADPLDSQVVTV KFQGGGAFNVIPDSV IGGTFRAF K
Sbjct:  141 VAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIGGTFRAFLK 295          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.295e-66
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 465
            V MLLG+A+ILQEHR+ELKGTVVLVFQPAEEGGGGA K+++ G +E + AIFG+HV   +PIG VASRPGP++AGSGFFEAVI GKGGHAA+P H+IDPILAASNVIVSLQ LVSREADPLDSQVVTV KFQGGGAFNVIPDSV IGGTFRAF K
Sbjct:  141 VAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIGGTFRAFLK 295          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 6.882e-60
Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRA 456
            TMLLGAAK+L+EH+EEL+GTV+LVFQPAEEGG GA K++EAGVLE V AIFGLHV   L +G+++SR G L+AGSG F+A I GKGGHAA+PQ +IDP+LAASNVI+SLQHLVSREADPLDSQVVTVA F+G  AFNVIPDSV IGGTFRA
Sbjct:  141 TMLLGAAKLLKEHQEELQGTVILVFQPAEEGGAGAKKIVEAGVLENVGAIFGLHVSNLLGLGQLSSREGLLMAGSGRFKATISGKGGHAALPQFAIDPVLAASNVILSLQHLVSREADPLDSQVVTVATFEGSDAFNVIPDSVTIGGTFRA 291          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 4.616e-56
Identity = 106/154 (68.83%), Postives = 126/154 (81.82%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            VTMLLGAAKIL EHR  L+GTVVL+FQPAEEG  GA K+ E G L+ V AIFG+H+   +P G+ ASR G  LAG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQ LVSRE DPLDS+VVTV+K  GG AFNVIPDS+ IGGT RAF+
Sbjct:  143 VTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFT 296          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 8.706e-55
Identity = 103/154 (66.88%), Postives = 124/154 (80.52%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            V MLLGAAKILQ+HR+ L+GTVVL+FQPAEEG  GA  + E G L+ V AIFG+H+ P  P G+ AS  G  +AG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQHLVSRE DP DS+VVTV K  GG AFNVIPDS+ IGGT RAF+
Sbjct:  142 VAMLLGAAKILQQHRQHLQGTVVLIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTPFGKAASLAGSFMAGAGAFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQHLVSRETDPSDSKVVTVTKVNGGNAFNVIPDSITIGGTLRAFT 295          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.308e-54
Identity = 106/153 (69.28%), Postives = 123/153 (80.39%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            TMLLGAA+ILQE R EL+GTVVL+FQP EE G GA +++EAG ++ V AIFG HV   LP G V SRPGPLLAG GFFEAVI GKGGHAA P  S+DPILAAS V+++LQ LVSREADPL++QVVTV +F  G A NVIP+S+ IGGTFR FS
Sbjct:  156 TMLLGAARILQERRHELQGTVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFEAVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGDALNVIPESITIGGTFRVFS 308          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 2.453e-49
Identity = 96/153 (62.75%), Postives = 120/153 (78.43%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            TMLLGAAK+LQ  +++LKGTV LVFQPAEEG  GA  VL+ GVL+ V+AIFGLHVDP + +G V SRPGP LA SG F A I GKGGHAA P +++DPIL AS+ IVSLQ +V+RE DPL++ V++V   +GG A+NVIP+SV  GGTFR+ +
Sbjct:  163 TMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDPLEAAVISVTFMKGGDAYNVIPESVSFGGTFRSLT 315          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 4.185e-49
Identity = 90/154 (58.44%), Postives = 121/154 (78.57%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            VTMLLGAAK+LQ  ++ELKGT+ LVFQPAEEG  GA+ VLE+G+L+ V+ IFGLHV PNLP+G VASRPGP ++ +  F A   GKGGHA +P  ++DP++A S+ ++SLQ LVSRE DPL++ VV++   +GG A+NVIP+S  +GGTFR+ +
Sbjct:  151 VTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESASLGGTFRSMT 304          
BLAST of FC929220 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 6.043e-48
Identity = 94/152 (61.84%), Postives = 117/152 (76.97%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFS 462
            MLLGAAK+LQ+ + ELKGTV LVFQPAEEG  GA+ VL+ GVL+ V+A+FG+HVDP LP+G VA+RPGP  A SG F A I GKGGHAA P  +IDP++AASN I+SLQ +V+RE DPL   VV++   +GG A+NVIP SV  GGT R+ +
Sbjct:  149 MLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRFLATITGKGGHAAFPHDAIDPVVAASNAILSLQQIVAREIDPLQGAVVSITFVKGGEAYNVIPQSVEFGGTMRSMT 300          
The following BLAST results are available for this feature:
BLAST of FC929220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ILL4_ARATH3.082e-6883.66IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL1_ORYSJ1.295e-6680.65IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.295e-6680.65IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL5_ARATH6.882e-6076.16IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL2_ARATH4.616e-5668.83IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ARATH8.706e-5566.88IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL2_ORYSJ3.308e-5469.28IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL7_ORYSJ2.453e-4962.75IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL8_ORYSJ4.185e-4958.44IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL9_ORYSJ6.043e-4861.84IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929220 ID=FC929220; Name=FC929220; organism=Citrus clementina; type=EST; length=466bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGCCTTTTCAAAGG
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