FC929221

Overview
NameFC929221
Unique NameFC929221
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length832
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15027 contig Ccv1_Contig15027:1..832. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929221 vs. ExPASy Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.040e-48
Identity = 88/194 (45.36%), Postives = 125/194 (64.43%), Query Frame = 3
Query:  249 LSCLSWRLGVETNNVIGWATVPEKCADYVGHYMLGQQYRLDSEVVANEAILHAQSLTLAGDGKDIWVFDIDETSLCNLPYYAKNGFGVKPYNPTMFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFNTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDHWSD 830
            L C +WR  VETNN+  W T+PE+CADYV  YM+G  Y+++ + V++EA  +A+S+ L  DG+D+W+FD+DET L NLPYY+ + +G++ ++   F++WV  G A                G K+  LTGR E  R+VT  NL +AGF+ W KLIL+GS   G+TA  YKS  R  +  +G+RI+GN GD WSD
Sbjct:   41 LKCTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEEGFRIVGNSGDQWSD 234          
BLAST of FC929221 vs. ExPASy Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.238e-46
Identity = 92/197 (46.70%), Postives = 126/197 (63.96%), Query Frame = 3
Query:  243 PGLSCLSWRLGVETNNVIGWATVPEKCADYVGHYMLGQQYRLDSEVVANEAILHAQSLTLAGDGKDIWVFDIDETSLCNLPYYAKNGFGVKPYNPTMFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFNTWEKLILKG-SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDHWSD 830
            P + C SWRL VE +N+ G+ T+PE+C +    Y+ G+QYR DS+ V  +A  +A+ L +    KD +VF ID T L N+PYY K+G+GV+ +N T+++EWVN G A                G KI+FL+GR  D++ VTEANLK AG++TWEKLILK     S   AV YK++ R+KL  +GY I+G IGD WSD
Sbjct:   38 PEVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV--HPKDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSD 232          
BLAST of FC929221 vs. ExPASy Swiss-Prot
Match: S25K_SOYBN (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 8.238e-46
Identity = 92/197 (46.70%), Postives = 126/197 (63.96%), Query Frame = 3
Query:  243 PGLSCLSWRLGVETNNVIGWATVPEKCADYVGHYMLGQQYRLDSEVVANEAILHAQSLTLAGDGKDIWVFDIDETSLCNLPYYAKNGFGVKPYNPTMFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFNTWEKLILKG-SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDHWSD 830
            P + C SWRL VE +N+ G+ T+PE+C +    Y+ G+QYR DS+ V  +A  +A+ L +    KD +VF ID T L N+PYY K+G+GV+ +N T+++EWVN G A                G KI+FL+GR  D++ VTEANLK AG++TWEKLILK     S   AV YK++ R+KL  +GY I+G IGD WSD
Sbjct:   35 PEVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV--HPKDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSD 229          
BLAST of FC929221 vs. ExPASy Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42
Identity = 89/203 (43.84%), Postives = 126/203 (62.07%), Query Frame = 3
Query:  222 GSRNNDVPGLSCLSWRLGVETNNVIGWATVPEKCADYVGHYMLGQQYRLDSEVVANEAILHAQSLTLAGDGKDIWVFDIDETSLCNLPYYAKNGFGVKPYNPTMFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFNTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDHWSD 830
            G R+++V    C S+RL VE +N+  + T+PE+C +    Y+ G+Q+R DS+ V  +A  +A    +  +  DI++F ID T L N+PYY K+G+GV+ +N T+++EWVN G A                G KIVFL+GR  D+  VTEANLK AGF+TWE+LILK        A+ YKS+ R+ L  +GYRI+G IGD WSD
Sbjct:   35 GERSSEV---KCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFYASEREVHHN--DIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDPHLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSD 232          
BLAST of FC929221 vs. ExPASy Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.352e-37
Identity = 82/195 (42.05%), Postives = 115/195 (58.97%), Query Frame = 3
Query:  252 SCLSWRLGVETNNVIGWATVPEKCADYVGHYML-GQQYRLDSEVVANEAILHAQSLTLAGDGKDIWVFDIDETSLCNLPYYAKNGFGVKPYNPTMFNEWVNTG-KAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFNTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDHWSD 830
            +C SW LGVET+N+I + TVP  C DYV  Y++  +QY+ DS+ V  EA  +A+ L L  D  ++W+FD+D+T L ++PYYAK G+G +  +P  +  W+ TG                   GI+ + L+ R +  +NVT  NL+ AG   W+ LILK +  S    VVYKS  RK L  KGY I+GNIGD W+D
Sbjct:   51 NCRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNG-SNLRQVVYKSKVRKSLVKKGYNIVGNIGDQWAD 244          
BLAST of FC929221 vs. ExPASy Swiss-Prot
Match: VSP1_ARATH (Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.542e-35
Identity = 78/195 (40.00%), Postives = 112/195 (57.44%), Query Frame = 3
Query:  252 SCLSWRLGVETNNVIGWATVPEKCADYVGHYML-GQQYRLDSEVVANEAILHAQSLTLAGDGKDIWVFDIDETSLCNLPYYAKNGFGVKPYNPTMFNEWVNTGKA-XXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFNTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDHWSD 830
            +C SW LGVET+N+I + TVP  C  YV  Y++  +QY+ DS+ V  EA  +A+ L L  D  ++W+FD+D+T L ++PYYAK G+G +   P  +  W+ +G++                 GI+ + ++ R +    VT  NLK  G   W+ LILK +  S  T VVYKS  R  L  KGY I+GNIGD W+D
Sbjct:   56 NCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNG-SKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWAD 249          
The following BLAST results are available for this feature:
BLAST of FC929221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PPA1_SOLLC1.040e-4845.36Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1... [more]
VSPA_SOYBN8.238e-4646.70Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE... [more]
S25K_SOYBN8.238e-4646.70Stem 31 kDa glycoprotein (Fragment) OS=Glycine max... [more]
VSPB_SOYBN9.425e-4243.84Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE... [more]
VSP2_ARATH5.352e-3742.05Vegetative storage protein 2 OS=Arabidopsis thalia... [more]
VSP1_ARATH6.542e-3540.00Vegetative storage protein 1 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2AD01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929221 ID=FC929221; Name=FC929221; organism=Citrus clementina; type=EST; length=832bp
GGCACGAGGTTTTTATCGTGAGGAAAAACAATATTACAGTTGTAATGAGC
ATGGGAGGGGTGTCACTGCCATTATTATTCTTTTTTCTGGCTACCATATC
AGCAACATCCCATGGATTTAGCATGGACATCCGCCATCTTTTTCTGGCTA
CCATACCAGCAACATCCCATGGATTTAGCATGGACATCCCCCATCAGATT
CATCTTCTCCGACCGAAAGCCGGTTCCCGGAACAACGATGTGCCCGGCTT
GTCCTGCCTGAGTTGGCGACTCGGAGTGGAAACTAATAACGTTATAGGAT
GGGCGACTGTTCCCGAAAAATGTGCAGACTACGTGGGGCATTACATGTTA
GGCCAGCAGTACCGCCTGGACTCTGAAGTGGTTGCTAATGAGGCCATTCT
CCATGCTCAGAGCCTCACGCTTGCTGGCGACGGCAAGGACATTTGGGTTT
TCGACATAGATGAAACCTCGCTATGTAATTTGCCATATTATGCTAAGAAT
GGATTCGGGGTGAAGCCGTACAACCCTACTATGTTTAATGAATGGGTTAA
CACCGGAAAAGCACCACCGCTGCCAGAGAGCCTTAAGCTTTACAAAAAAT
TATTATTGCTTGGAATTAAGATTGTATTCCTCACGGGAAGACCAGAAGAT
CAGAGAAATGTTACAGAAGCTAATTTAAAGCATGCTGGATTCAACACTTG
GGAGAAGCTCATCCTCAAGGGATCATCTCATTCAGGAGAAACAGCAGTGG
TGTACAAATCAAGTGAAAGAAAGAAGCTTGAGATGAAAGGGTACAGAATT
ATTGGAAACATAGGTGATCATTGGAGCGATCT
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