FC929260

Overview
NameFC929260
Unique NameFC929260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15011 contig Ccv1_Contig15011:98..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.533e-39
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 224
            DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ
Sbjct:  262 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 335          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.117e-30
Identity = 57/74 (77.03%), Postives = 68/74 (91.89%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 224
            DQ+EI+SNGKYK+V HRTTVNK+KTRMSWPVFLEPP D  VGP+P+LV++ENP K+K KK+KDY+YCKLNKLPQ
Sbjct:  261 DQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDYAYCKLNKLPQ 334          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.459e-30
Identity = 57/74 (77.03%), Postives = 67/74 (90.54%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 224
            DQ+EILSNGKYK+V HRTTVNKDKTRMSWPVFLEPP++  VGP+P+L+ + NPPK+K KK+KDY YCKLNKLPQ
Sbjct:  275 DQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDYVYCKLNKLPQ 348          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.235e-29
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 224
            DQIEI+SNGKYK+V HRTTVNKDKTRMSWPVFLEPP + + GP+ +L+ DENP K+K KK+KDY YCKLNKLPQ
Sbjct:  264 DQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDENPAKFKTKKYKDYVYCKLNKLPQ 337          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.751e-29
Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 224
            DQ+EI+SNGKY +VLHRTTVNKDKTR+SWPVFLEPPAD VVGP PQLV+  N PKYK KK+ DY YCK+NKLPQ
Sbjct:  264 DQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPKYKTKKYGDYVYCKINKLPQ 337          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.006e-29
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 224
            DQ+EILSNGKYK+V HRTTVNK KTRMSWPVFLEP ++  VGP+P L+++ NPPK+K KK+KDY YCKLNKLPQ
Sbjct:  276 DQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFKTKKYKDYVYCKLNKLPQ 349          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.669e-26
Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLP 221
            DQI  LSNG+YK VLHRTTV+K+KTRMSWPVFLEPP + +VGPLP+L  D+NPPK+K   FKDYSY KLNKLP
Sbjct:  262 DQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDNPPKFKPFAFKDYSYRKLNKLP 334          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.872e-20
Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKL 218
            DQI +LSNGKYK VLH+TTV+K+KTRMSWPV + P  D VVGPLP+L  +++PPK+K   +KDY + K+  L
Sbjct:  216 DQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDYVHNKITFL 287          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.466e-14
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV-GPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ*IFHYEKNN 251
            D +EILSNGKYK++LHR  VNK+K R+SW VF EPP D +V  PLP++V  E+P K+  + F  +   KL    Q     EKN+
Sbjct:  273 DTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEKND 356          
BLAST of FC929260 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.274e-14
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV-GPLPQLVDDENPPKYKAKKFKDYSYCKL 209
            D IEILSNGKYK++LHR  VNK+K R SW +F EPP + ++  PLP+ V +  PP++  + F  +   KL
Sbjct:  277 DTIEILSNGKYKSILHRGVVNKEKVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKL 346          
The following BLAST results are available for this feature:
BLAST of FC929260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
FLS_CITUN8.533e-39100.00Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS_EUSGR1.117e-3077.03Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS_PETHY1.459e-3077.03Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_PETCR1.235e-2975.68Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS_MALDO2.751e-2978.38Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_SOLTU8.006e-2974.32Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FLS1_ARATH1.669e-2673.97Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_MATIN8.872e-2059.72Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
LDOX_ARATH1.466e-1448.81Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_PETHY7.274e-1448.57Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DC09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929260 ID=FC929260; Name=FC929260; organism=Citrus clementina; type=EST; length=410bp
GGGACCAGATCGAGATTCTGAGCAATGGCAAGTACAAAGCCGTGCTGCAT
AGAACCACTGTTAACAAGGACAAGACGAGAATGTCGTGGCCAGTTTTCTT
GGAGCCACCTGCGGATACGGTGGTGGGTCCCCTTCCTCAGCTGGTTGACG
ATGAAAATCCTCCAAAGTACAAGGCCAAGAAGTTCAAGGATTACAGTTAC
TGTAAACTTAACAAACTTCCTCAGTAGATTTTTCATTATGAGAAAAATAA
CACCAGTATCCGCTGGCCGCTCATGTTTGATCTCGTCACTGTACGTTAGC
GATGCTTGTTTGTTGTTGCGATCTTGTTTCTGAAATGTAATCGCGGGTGT
TAGCAATAATAAATAATCCTTTCATTTAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
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