FC929365

Overview
NameFC929365
Unique NameFC929365
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length810
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9269 contig Ccv1_Contig9269:11..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.200e-72
Identity = 129/154 (83.77%), Postives = 136/154 (88.31%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            MPNP+VFFDM+VGGQPAGRIVMELFAD TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQ            ESIYG+ FADENF+KKHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFGQVVEGMDVV+ IEKVGS
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.973e-69
Identity = 122/154 (79.22%), Postives = 133/154 (86.36%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M NPKVFFD+T+GG PAGR+VMELFAD TP+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVIPGFMCQ            ESIYG+ F DENFVKKHTGPGILSMANAGPGTNGSQFF+CTAKTEWL+GKHVVFGQVVEGMDV++  E VGS
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGS 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 9.565e-68
Identity = 119/154 (77.27%), Postives = 132/154 (85.71%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M NPKVFFDM + G PAGRIVMEL+AD TPRTAENFRALCTGEKG+G+SGKPLHYKGS+FHRVIP FMCQ            ESIYG+ FADENF+K+HTGPGILSMANAG GTNGSQFF+CT KTEWLDGKHVVFG+V+EGM+VV+ IEKVGS
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGS 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.953e-66
Identity = 119/152 (78.29%), Postives = 128/152 (84.21%), Query Frame = 3
Query:  354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            NPKV+FDMTVGG+ AGRIVMEL+AD TP TAENFRALCTGE+GIGK GKPLHYKGSSFHRVIP FMCQ            ESIYGS F DENF+KKHTGPGILSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVVEG++VV+ IEKVGS
Sbjct:    4 NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGS 155          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.443e-65
Identity = 114/152 (75.00%), Postives = 129/152 (84.87%), Query Frame = 3
Query:  354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            +PKVFFDMT+GG PAG+IVMEL+ D TP+TAENFRALCTGEKG+G+SGKPLH+KGSSFHRVIP FMCQ            ESIYG+ F DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVV+ IEK+GS
Sbjct:    4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGS 155          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 9.899e-65
Identity = 119/154 (77.27%), Postives = 126/154 (81.82%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M NPKV+FDMTVG + AGRIVMEL+AD  P TAENFRALCTGE+GIGKSGKPLHYKGS+FHRVIP FMCQ            ESIYG  F DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+ IEKVGS
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGS 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.688e-64
Identity = 116/154 (75.32%), Postives = 127/154 (82.47%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M  PKV+FDMT+ GQPAGRIVMEL+ D TPRTAENFRALCTGEKG+G +GKPLH+KGS FHRVIP FMCQ            ESIYGS F DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVV+ IEKVGS
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGS 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.867e-63
Identity = 114/154 (74.03%), Postives = 126/154 (81.82%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M NP+VFFDM++ G P GRI MELFAD TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQ            ESIYG+ F DENF+KKHTG GILSMAN+GP TNGSQFF+CT KT WLDGKHVVFGQVV+G+DVV+ IEKVGS
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGS 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.184e-63
Identity = 114/154 (74.03%), Postives = 125/154 (81.17%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M NP+VFFDMTVGG PAGRIVMEL+A+  P+TAENFRALCTGEKG+GKSGKPLHYKGS+FHRVIP FMCQ            ESIYG  F DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVV+ IEKVG+
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGT 154          
BLAST of FC929365 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.747e-61
Identity = 111/154 (72.08%), Postives = 124/154 (80.52%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQGIEKVGS 809
            M NPKVFFD+ +G   AGR+VMELFADVTPRTA NFRALCTGE GIGK+GK LHYKGS+FHR+IPGFMCQ            ESIYGS F DENF  KHTGPGILSMAN+GP TNGSQFF+CT KT WLDGKHVVFG+VV+G +VV+ +E VGS
Sbjct:    1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGS 154          
The following BLAST results are available for this feature:
BLAST of FC929365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYPH_CATRO2.200e-7283.77Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC2.973e-6979.22Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU9.565e-6877.27Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH8.953e-6678.29Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP19B_ARATH4.443e-6575.00Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYPH_BRANA9.899e-6577.27Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18C_ARATH1.688e-6475.32Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CP18D_ARATH1.867e-6374.03Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_MAIZE3.184e-6374.03Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP19C_ARATH1.747e-6172.08Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2BC01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929365 ID=FC929365; Name=FC929365; organism=Citrus clementina; type=EST; length=810bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTNCAGGGCATCGAGAAA
GTGGGGTCCA
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