FC929394
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929394 vs. ExPASy Swiss-Prot
Match: P2R3C_RAT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Rattus norvegicus GN=Ppp2r3c PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11 Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 3 Query: 279 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDG 818 M W LRR + S E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ I G E M NYE+F + E+ GPKC++FF+ F K D GR++I+ F+ YVMR V L Q RI +S D G Sbjct: 1 MDWKDVLRRRLASPNSDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRVSIMQFFNYVMRKVWLHQTRIGLSLYDVAGQG 186
BLAST of FC929394 vs. ExPASy Swiss-Prot
Match: P2R3C_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Mus musculus GN=Ppp2r3c PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11 Identity = 58/191 (30.37%), Postives = 88/191 (46.07%), Query Frame = 3 Query: 279 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDG 818 M W LRR + S E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ I G E M NYE+F + E+ GPKC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G Sbjct: 1 MDWKDVLRRRLASPNTDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQG 186
BLAST of FC929394 vs. ExPASy Swiss-Prot
Match: P2R3C_BOVIN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus GN=PPP2R3C PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.390e-11 Identity = 53/190 (27.89%), Postives = 87/190 (45.79%), Query Frame = 3 Query: 279 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDG 818 M W LRR + + + + E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ +NYE+F + E+ GPKC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G Sbjct: 1 MDWKEILRRRLATPSTSPHKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQG 186 The following BLAST results are available for this feature:
BLAST of FC929394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929394 ID=FC929394; Name=FC929394; organism=Citrus clementina; type=EST; length=818bpback to top |