FC929422

Overview
NameFC929422
Unique NameFC929422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15039 contig Ccv1_Contig15039:1..835. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.920e-93
Identity = 161/185 (87.03%), Postives = 175/185 (94.59%), Query Frame = -3
Query:  222 SSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELSL 776
            S AKMEVATDE +TPIKQD KKGKLRYYPYNINWNYGL PQTWEDPS ANSEVEG FGDNDPVDVVEIGE +RKIG+IL++KPL+ALAMIDEGELDWKIVAISLDDPKA LVNDV+DVEKHFPGTLTAIRDWFRDYKIPDGKPAN+FGLG+K A+KDYALK+I ETNESWAKLVKRS++AG+LSL
Sbjct:  115 SKAKMEVATDEDFTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILKIKPLAALAMIDEGELDWKIVAISLDDPKAHLVNDVEDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGDKPANKDYALKIIQETNESWAKLVKRSVDAGDLSL 299          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR1_CHLRE (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ppa1 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.314e-67
Identity = 122/187 (65.24%), Postives = 148/187 (79.14%), Query Frame = -3
Query:  219 SSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRS-IEAGELSLV 776
            +SAKMEVATDE  TPIKQD+KKGKLR+YPYNINWNYG+ PQTWEDP   ++ + GA GDNDPVDVVEIG    K G + +VKP+  LAMID+GELDWK++AIS DDPKAAL NDV+DVEKHFPG +  + +WFRDYKIPDGKPANKFG  NK  +K++ L VI ET+E++ KL   +   + ELSL+
Sbjct:   95 TSAKMEVATDEPRTPIKQDVKKGKLRFYPYNINWNYGMLPQTWEDPGHTDATL-GAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMIDDGELDWKVIAISADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDNKCMNKEFTLNVIKETHEAYVKLKSGARANSEELSLI 280          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_MACFA (Inorganic pyrophosphatase OS=Macaca fascicularis GN=PPA1 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.906e-50
Identity = 101/197 (51.27%), Postives = 129/197 (65.48%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ VK L  LAMIDEGE DWK++AI++DDP AA  ND++DV++  PG L A  DWFR YK+PDGKP N+F    +  DKD+A+ +I  T++ W  LV +      +S
Sbjct:   46 MVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDIIKSTHDHWKALVTKKTNGKGIS 241          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_HUMAN (Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.906e-50
Identity = 101/197 (51.27%), Postives = 129/197 (65.48%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ VK L  LAMIDEGE DWK++AI++DDP AA  ND++DV++  PG L A  DWFR YK+PDGKP N+F    +  DKD+A+ +I  T++ W  LV +      +S
Sbjct:   46 MVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDIIKSTHDHWKALVTKKTNGKGIS 241          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_CANGA (Inorganic pyrophosphatase OS=Candida glabrata GN=IPP1 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.906e-50
Identity = 99/199 (49.75%), Postives = 139/199 (69.85%), Query Frame = -3
Query:  222 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVK-RSIEAGELSL 800
            +V    R ++AK+E+  +E   PI QD KKGKLRY    +P++    NYG FPQTWEDP+  + E + A GDNDPVDV+EIGE     G++ +VK L  +A++DEGE DWK++AI ++DP A  +ND++DVEK+FPG L A  +WFR YKIPDGKP N+F    +A +K YAL +I ETNESW +L+  +S ++ +++L
Sbjct:   46 MVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRYVRNCFPHHGYIHNYGAFPQTWEDPNQTHPETK-AVGDNDPVDVLEIGETIGYTGQVKQVKVLGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETNESWKQLIAGKSTDSKDIAL 243          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_BOVIN (Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.490e-50
Identity = 100/197 (50.76%), Postives = 131/197 (66.50%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+RVK L  LAMIDEGE DWK++AI+++DP AA  ND++DV++  PG L A  DWFR YK+PDGKP N+F    +  DK++A+ +I  T++ W  LV +  +   +S
Sbjct:   46 MVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVEDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKNFAIDIIESTHDYWRALVTKKTDGKGIS 241          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_MOUSE (Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.252e-50
Identity = 100/197 (50.76%), Postives = 129/197 (65.48%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP  ++    G  GDNDP+DV EIG +    GEI+RVK L  LAMIDEGE DWK++AI++DDP AA   D+ DVE+  PG L A  DWFR YK+PDGKP N+F    +  +KD+A+ +I  T++ W  LV +  +   +S
Sbjct:   46 MVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHT-GCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYKDISDVERLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKNKDFAVDIIKSTHDYWKALVTKKTDGKGIS 241          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_PONAB (Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.236e-49
Identity = 100/197 (50.76%), Postives = 128/197 (64.97%), Query Frame = -3
Query:  225 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSIEAGELS 800
            +V    R S+AKME+AT +   PIKQD+KK KLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ VK L  LAMIDEGE DWK++AI++DDP AA  ND++DV++  PG L A  DWFR YK+PDGKP N+F    +  DKD+A+ +I  T++ W  LV +      +S
Sbjct:   46 MVVEVPRWSNAKMEIATKDPLNPIKQDVKKRKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINMDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDIIKSTHDHWKALVTKKTNGKGIS 241          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_YEAST (Inorganic pyrophosphatase OS=Saccharomyces cerevisiae GN=IPP1 PE=1 SV=4)

HSP 1 Score: 195.667 bits (496), Expect = 2.753e-49
Identity = 93/187 (49.73%), Postives = 132/187 (70.59%), Query Frame = -3
Query:  255 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLV 800
            +V    R ++AK+E+  +E   PI QD KKGKLR+    +P++    NYG FPQTWEDP+ ++ E + A GDNDP+DV+EIGE     G++ +VK L  +A++DEGE DWK++AI ++DP A  +ND++DVEK+FPG L A  +WFR YKIPDGKP N+F    +A +K YAL +I ET++SW +L+
Sbjct:   46 MVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETK-AVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQLI 231          
BLAST of FC929422 vs. ExPASy Swiss-Prot
Match: IPYR_KLULA (Inorganic pyrophosphatase OS=Kluyveromyces lactis GN=IPP1 PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.753e-49
Identity = 97/199 (48.74%), Postives = 137/199 (68.84%), Query Frame = -3
Query:  222 LVPNSARGSSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVK-RSIEAGELSL 800
            +V    R ++AK+E+  +E   PI QD KKGKLR+    +P++    NYG FPQTWEDP+ ++ E + A GDNDP+DV+EIGE+    G++ +VK L  +A++DEGE DWK++AI ++DP A  +ND++DVEKH PG L A  +WFR YKIPDGKP N+F    +A +K Y L VI E NE+W KL+  +S +A ++ L
Sbjct:   46 MVVEIPRWTNAKLEITKEEPLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNESHPETK-AVGDNDPLDVLEIGEQVAYTGQVKQVKVLGVMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKHLPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYTLDVIRECNEAWKKLISGKSADAKKIDL 243          
The following BLAST results are available for this feature:
BLAST of FC929422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
IPYR1_ARATH6.920e-9387.03Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR1_CHLRE1.314e-6765.24Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR_MACFA1.906e-5051.27Inorganic pyrophosphatase OS=Macaca fascicularis G... [more]
IPYR_HUMAN1.906e-5051.27Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 ... [more]
IPYR_CANGA1.906e-5049.75Inorganic pyrophosphatase OS=Candida glabrata GN=I... [more]
IPYR_BOVIN2.490e-5050.76Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE... [more]
IPYR_MOUSE3.252e-5050.76Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 ... [more]
IPYR_PONAB1.236e-4950.76Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 ... [more]
IPYR_YEAST2.753e-4949.73Inorganic pyrophosphatase OS=Saccharomyces cerevis... [more]
IPYR_KLULA2.753e-4948.74Inorganic pyrophosphatase OS=Kluyveromyces lactis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2BH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2BH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929422 ID=FC929422; Name=FC929422; organism=Citrus clementina; type=EST; length=835bp
TTTTTTTTTTCCGAGCTACACCCCAAGTATTTTATTCCACGACGTGACTG
AAATTAAAGGATTCAAAATAATGTTCAAATCCGCAAAAAAATGGTTCTTC
AATTTTGTTCATCACATGTAGTACATAATGCAAGCAGCTACATGATCAAT
AGACAATCCAAAACTCAACAATGGGAGAGAAGTAGCCGAGCTGCACCAAC
TCCGATGAGTTGCAGTTATACAAGCGATAGCTCGCCAGCCTCAATCGACC
TCTTTACAAGTTTAGCCCATGATTCGTTTGTCTCGGTGATCACCTTTAAA
GCATAATCCTTGTCTGCAGCCTTGTTGCCGAGACCAAACTTGTTGGCAGG
CTTTCCGTCGGGGATCTTGTAGTCTCTAAACCAGTCCCTGATCGCCGTGA
GAGTTCCAGGAAAATGCTTCTCGACATCATCAACATCGTTTACAAGGGCA
GCCTTTGGATCATCCAATGAAATTGCCACTATTTTCCAGTCAAGTTCACC
TTCATCAATCATGGCTAAGGCACTCAAGGGCTTGACCCTAAGAATTTCAC
CAATCTTTCTCCTTCTTTCACCAATCTCAACAACATCAACTGGATCATTA
TCCCCAAATGCCCCTTCAACTTCAGAGTTTGCAAAAGATGGATCTTCCCA
TGTTTGTGGAAACAATCCATAATTCCAATTTATGTTGTATGGGTAGTATC
GAAGCTTCCCCTTCTTTATATCCTGTTTAATAGGGGTGTATAGCTCATCA
GTAGCAACCTCCATCTTTGCACTTGATCCTCGTGCCGAATTCGGCACGAG
GAGAGAGTCGGTTAGCCAAACAAAACGAAAGTAAA
back to top