FC929427

Overview
NameFC929427
Unique NameFC929427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15045 contig Ccv1_Contig15045:1..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: Y5262_ARATH (Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.761e-14
Identity = 74/271 (27.31%), Postives = 122/271 (45.02%), Query Frame = 3
Query:    6 EGHYDLVRELL-RIDGNHLIKLTSLRRIRRLETVWDDEEQ-FDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLI-ASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSA 809
            EG  DL+ E++   DG  L +L + +       ++   E  + D+ K   K +  +    K+KNG ++           + AA  G+L  +  L++ NP L F   +   T   + AA   + ++   + D  V    +    G+                   A+H+AAR G+  I+K+L+E    ++T  DK+G T LH A      E+V  L+ A   +INS D++GNTPLHIA  + +  +V+ ++          N SGET L  A
Sbjct:   27 EGKTDLLLEMIGEHDGVELKELLAEQNQSGETALYVAAEYGYTDMVKILMKHSDSVLAGTKAKNGFDAF----------HIAAKNGNLQVLDVLIEANPELSF-TFDSSKTTALHTAASQGHGEIVCFLLDKGVDLAAIARSNGKT------------------ALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMAVKGQNTEIVDVLMEADGSLINSADNKGNTPLHIAVRKNRAEIVQTVLKYCEVSRVAVNKSGETALDIA 268          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: Y2168_ARATH (Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14
Identity = 61/232 (26.29%), Postives = 105/232 (45.26%), Query Frame = 3
Query:  117 EQFDDVAKCRSKVARKLFLECKSKNGKNSLIRAGYGGWLLYTAASAGDLGFVKQLLDKNPLLVFGEGEYGVTDIFYAAARSKNCDVFRLIYDFAVSPRFLTAKGGELEEHIEEIPSVYKWEMMNRAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLI-ASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSA 809
            E  +D+ +   + +    ++ +SK+  N+           + AA  G LG VK+LL   P L     +   T   YAAA   + ++   + D   S   +  K G+                   ++H A R G L+I+K L+E    ++  +DK+G T LH A     +EVV++++ A + I+N  D +GNT LHIA  + +P +   L+  +   ++  N   ET +  A
Sbjct:   69 ENLEDIFRYLIRFSSLETVKIRSKSDMNAF----------HVAAKRGHLGIVKELLRLWPELC-RICDASNTSPLYAAAVQDHLEIVNAMLDVDPSCAMIVRKNGKT------------------SLHTAGRYGLLRIVKALIEKDAAIVGVKDKKGQTALHMAVKGRSLEVVEEILQADYTILNERDRKGNTALHIATRKARPQITSLLLTFTAIEVNAINNQKETAMDLA 271          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: ANR28_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Homo sapiens GN=ANKRD28 PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  489 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS 815
            RA+H AA  G+++++K L+ +  +V T +DK+  T LHAAA  G + VVK L+     +N  +  GNTPLH+A Y GQ  VV  LI    ++++ KN  G T LH A +
Sbjct:  208 RAIHWAAYMGHIEVVKLLVSHGAEV-TCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNAYGNTPLHVACYNGQDVVVNELIDCG-AIVNQKNEKGFTPLHFAAA 314          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: ANR28_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus GN=Ankrd28 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12
Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  489 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS 815
            RA+H AA  G+++++K L+ +  +V T +DK+  T LHAAA  G + VVK L+     +N  +  GNTPLH+A Y GQ  VV  LI    + ++ KN  G T LH A +
Sbjct:  175 RAIHWAAYMGHIEVVKLLVSHGAEV-TCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNAYGNTPLHVACYNGQDVVVNELIDCGAN-VNQKNEKGFTPLHFAAA 281          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: ANR44_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  489 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS 815
            RA+H AA  G+L ++  L+ +  +V T +DK+G T LHAAA  GQ+ VVK L+     I+  +  GNT LHIA Y GQ AVV  LI    + ++  N SG T LH A +
Sbjct:  175 RALHWAAYMGHLDVVALLINHGAEV-TCKDKKGYTPLHAAASNGQISVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDYGAN-VNQPNNSGFTPLHFAAA 281          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: ANR44_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  489 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS 815
            RA+H AA  G+L ++  L+ +  +V T +DK+G T LHAAA  GQ+ VVK L+     I+  +  GNT LHIA Y GQ AVV  LI    + ++  N +G T LH A +
Sbjct:  175 RALHWAAYMGHLDVVALLINHGAEV-TCKDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDYGAN-VNQPNNNGFTPLHFAAA 281          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: ANR44_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  489 RAVHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVS 815
            RA+H AA  G+L+++  L+ +  +V T +DK+G T LHAAA  GQ+ +VK L+     I+  +  GNT LHIA Y GQ +VV  LI    + ++  N +G T LH A +
Sbjct:  175 RALHWAAYMGHLEVVALLINHGAEV-TCKDKKGYTPLHAAASNGQINIVKHLLNLGVEIDEMNIYGNTALHIACYNGQDSVVNELIDYGAN-VNQPNNNGFTPLHFAAA 281          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: ANR52_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Gallus gallus GN=ANKRD52 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 3
Query:  495 VHAAARGGNLKILKELLENCTDVLTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSA 809
            +H AA  G+L++LK L+    DV+  +DK+G T+LH AA  GQ+EVV+ L+     I+  +  GNT LHIA Y GQ AV   L+    + ++  N  G T LH A
Sbjct:  177 IHWAAFLGHLEVLKLLVARGADVMC-KDKKGYTLLHTAAASGQIEVVRHLLRLGVEIDEPNSFGNTALHIACYMGQDAVANELVNYGAN-VNQPNEKGFTPLHFA 279          
BLAST of FC929427 vs. ExPASy Swiss-Prot
Match: AKD1A_HUMAN (Ankyrin repeat and death domain-containing protein 1A OS=Homo sapiens GN=ANKDD1A PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  495 VHAAARGGNLKILKELLENCTDV-LTYRDKQGSTILHAAAGRGQVEVVKDLIASFDIINSTDHQGNTPLHIAAYRGQPAVVEALILASPSMISVKNTSGETFLHSAVSG 818
            +H AA+ G++ +L  ++E+  DV L + DK G T  H AA  GQ++ +  L+ S    N  D +GNT LH+AA RG  AV++ L+      +  +N  G T LHSA  G
Sbjct:  128 LHCAAQKGHVPVLAFIMEDLEDVALDHVDKLGRTAFHRAAEHGQLDALDFLVGSGCDHNVKDKEGNTALHLAAGRGHMAVLQRLVDIGLD-LEEQNAEGLTALHSAAGG 235          
The following BLAST results are available for this feature:
BLAST of FC929427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
Y5262_ARATH1.761e-1427.31Ankyrin repeat-containing protein At5g02620 OS=Ara... [more]
Y2168_ARATH6.694e-1426.29Ankyrin repeat-containing protein At2g01680 OS=Ara... [more]
ANR28_HUMAN9.666e-1341.28Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR28_MOUSE1.649e-1241.28Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR44_MOUSE2.812e-1244.04Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR44_HUMAN6.265e-1243.12Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR44_CHICK1.069e-1141.28Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR52_CHICK1.823e-1141.90Serine/threonine-protein phosphatase 6 regulatory ... [more]
AKD1A_HUMAN6.927e-1138.53Ankyrin repeat and death domain-containing protein... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2CA04RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929427 ID=FC929427; Name=FC929427; organism=Citrus clementina; type=EST; length=861bp
GGCACGAGGGCCACTATGATTTAGTGAGGGAGCTTCTTCGCATTGACGGC
AATCATCTCATCAAGCTGACTTCTCTCAGGCGAATTCGCCGCCTTGAGAC
TGTTTGGGATGATGAAGAACAGTTTGATGATGTTGCCAAATGCAGATCCA
AGGTTGCTAGGAAACTGTTTCTTGAGTGTAAATCCAAGAATGGGAAGAAT
TCTCTCATAAGAGCTGGGTATGGTGGGTGGCTATTATACACTGCCGCATC
AGCTGGAGACTTGGGTTTTGTTAAACAGCTTCTTGACAAGAACCCACTTC
TTGTTTTTGGAGAAGGAGAGTATGGGGTTACTGATATCTTTTATGCTGCA
GCCAGGAGCAAAAACTGTGATGTTTTCAGGCTTATTTATGATTTCGCCGT
GTCGCCGAGGTTTTTGACAGCCAAGGGTGGAGAGTTGGAGGAGCACATTG
AGGAAATTCCTTCTGTTTACAAGTGGGAGATGATGAATAGAGCTGTCCAT
GCTGCTGCCAGGGGAGGAAACCTGAAGATCTTGAAGGAGCTTTTGGAGAA
TTGCACTGATGTCCTGACTTATAGAGATAAGCAGGGGTCAACTATCTTGC
ATGCAGCTGCTGGTAGAGGCCAGGTTGAGGTAGTGAAAGATCTTATAGCA
TCCTTTGATATCATCAACTCCACAGACCATCAAGGGAACACACCATTACA
TATTGCAGCCTACAGGGGCCAACCAGCAGTGGTTGAAGCTCTGATCCTTG
CTTCTCCTTCAATGATCTCTGTAAAGAACACTTCTGGAGAAACTTTTCTC
CACTCAGCAGTTTCCGGTTTCCAGACTTATGCTTTTAGAAGATTGGATCG
ACAGGTTAAGC
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