FC929436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.335e-51 Identity = 100/210 (47.62%), Postives = 137/210 (65.24%), Query Frame = -1 Query: 175 LGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSLSI 804 LGM SAV+T+CGQAYGA +Y +GI QR+ VL + +T LY +S PIL +G+S IA +F G+IPQI+A+AL P+Q+FLQAQ+IV P AY+S ++H LL+W+ SWW++V +YI+ S CK TW GF+ +AF G+ +FKL+ ASAVMLCLE WY Q LV++ GLL NP ++LD++SI Sbjct: 107 LGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISI 316
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.308e-20 Identity = 58/208 (27.88%), Postives = 106/208 (50.96%), Query Frame = -1 Query: 178 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSLS 801 G+ SA +TL Q YG+ + +G+ LQR +++L L + L++ ++ IL+ + P ++ +V IP + A L K+L Q IV P A +V+ L +++ VY+ + + + + F+YI++S + TW G++++ SFF+L+ S +MLC+E W ++I L G+L EL S++ Sbjct: 90 GLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVT 297
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19 Identity = 62/210 (29.52%), Postives = 107/210 (50.95%), Query Frame = -1 Query: 181 LGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWI--VVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSL 804 LG +A +TL +GA K + LGI LQ ++L++ + + +++ +S+PILIFL ++P++A ++ F+ LIP Y ++KFLQ Q I +YI T +++ L+++ V+ S+W+ +++ Q+ VK W G+ + F KLS VM+ E W F+I+ L+ G L LA S+ Sbjct: 63 LGGTTAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKG---AEAWNGWNKRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQSV 269
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19 Identity = 56/207 (27.05%), Postives = 101/207 (48.79%), Query Frame = -1 Query: 181 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSL 801 G+ A +TL Q +G + +++GI LQR ++L L L + + IL+ + P+++ ++V +P + A L + K+LQ Q I+ P + + L +++ +Y S +I +I F+YIV TW G++ F +F +L+ AS +MLC+E W F+I + L G+L +LA ++ Sbjct: 105 GLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAI 311
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19 Identity = 57/207 (27.54%), Postives = 103/207 (49.76%), Query Frame = -1 Query: 181 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSL 801 G+ SA +TL Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F+YI+ + TW G++++ SF +L+ S +MLC+E W +++ L G+L EL S+ Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.046e-18 Identity = 57/207 (27.54%), Postives = 101/207 (48.79%), Query Frame = -1 Query: 181 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSL 801 G+ SA +TL Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F YI+ + TW G++++ SF L+ S +MLC+E W +++ L G+L EL S+ Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.046e-18 Identity = 58/208 (27.88%), Postives = 108/208 (51.92%), Query Frame = -1 Query: 181 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSL 801 G+ SA +TL Q +G+N + +G+ LQR ++L L L + + PIL+ + +SP++AS + ++V +P + A A + +Q ++LQ Q I+ P A +++ L+++V ++ S + + + +VYI + K TW G++ +F +L+ S +MLC+E W ++I L GL+ EL S+ Sbjct: 109 GLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPA-AFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELGAQSV 315
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18 Identity = 59/208 (28.37%), Postives = 104/208 (50.00%), Query Frame = -1 Query: 181 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSL 801 G+ SA +TL Q++G + +G+ LQR ++L L +++ + +L+ L + PD+A A V+V IP + A A F +Q ++LQ+Q I+ P + A VV++ ++ +Y S + + F+Y+ HTW G+T + F S+ +L+ S M+C+E W F+I L GL+ EL ++ Sbjct: 100 GLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPA-AFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQAV 306
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18 Identity = 58/208 (27.88%), Postives = 99/208 (47.60%), Query Frame = -1 Query: 178 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSLS 801 G+ SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L ++V +Y S + + I F+YI+ + TW G++ + SF +L+ S +MLC+E W +++ L G+L EL S++ Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 298
BLAST of FC929436 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 56/208 (26.92%), Postives = 99/208 (47.60%), Query Frame = -1 Query: 178 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLVGLLPNPELALDSLS 801 G+ SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + I F+YI+ TW G++ + SF +L+ S +MLC+E W +++ L G+L EL S++ Sbjct: 90 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 297 The following BLAST results are available for this feature:
BLAST of FC929436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929436 ID=FC929436; Name=FC929436; organism=Citrus clementina; type=EST; length=867bpback to top |