FC929437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929437 vs. ExPASy Swiss-Prot
Match: KCO1_ARATH (Calcium-activated outward-rectifying potassium channel 1 OS=Arabidopsis thaliana GN=KCO1 PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.710e-44 Identity = 100/192 (52.08%), Postives = 130/192 (67.71%), Query Frame = 3 Query: 225 MASNGANQPLL-SGFVDSTSQTNNKDA----PKRRRLRRCRSAPQTDVAALD---INEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIEPTK 776 M+S+ A PLL + +D+ +Q N ++ ++RRLRR RSAP+ D D I+E +F PN +RV+++LA YL G+L FY V QI G KT+ ++D++YFCIVTMTTVGYGDLVPNS S+LL+CAFVF+GM LVG LS+AADYLV+KQE LLV+A H Q GPTDILKE+ K Sbjct: 1 MSSDAARTPLLPTEKIDTMAQDFNLNSRTSSSRKRRLRRSRSAPRGDCMYNDDVKIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHLRQSFGPTDILKELHTNK 192
BLAST of FC929437 vs. ExPASy Swiss-Prot
Match: KCO6_ARATH (Probable calcium-activated outward-rectifying potassium channel 6 OS=Arabidopsis thaliana GN=KCO6 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.802e-16 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 318 LRRCRSAPQTDVAA---LDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHR 725 L R ++AP V I +KD T S S+ ++ L YL G L ++ +T+ ++D +YFCIVTM T+GYGD+ PNSVV+KL S FV G G + + LS Y++D QE ++ + R Sbjct: 118 LHRSKTAPAMAVINDLHHPIRQKDPTETSRSVV-------RQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKR 249
BLAST of FC929437 vs. ExPASy Swiss-Prot
Match: KCO5_ARATH (Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic OS=Arabidopsis thaliana GN=KCO5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.822e-15 Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 270 DSTSQTNNKDAPKRRRLRRCRSAPQTDVAALDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVN-SQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQ 731 DS S N+ + R L R R+AP V D+ K S K ++ + L YL G +S Y+ N G++T+ ++D++YFCIVTM T+GYGD+ P + +K+ + FV G G + + LS +Y++D QE +++ + Q Sbjct: 68 DSDSDETNRFLSQTRPLHRSRTAPAM-VIIKDLRTKPPETKKPSPVSKSI--IRQAIFLLIVYLTLG-VSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQ 218
BLAST of FC929437 vs. ExPASy Swiss-Prot
Match: KCO2_ARATH (Probable calcium-activated outward-rectifying potassium channel 2 OS=Arabidopsis thaliana GN=KCO2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 3 Query: 432 RVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQE 698 + + L YL G L ++ +T+ ++D++YFCIVTM T+GYGD+ P+SVV+KL S FV G G + + LS Y++D QE Sbjct: 148 QAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYVLDLQE 236 The following BLAST results are available for this feature:
BLAST of FC929437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929437 ID=FC929437; Name=FC929437; organism=Citrus clementina; type=EST; length=830bpback to top |