FC929480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 5.030e-136 Identity = 233/276 (84.42%), Postives = 249/276 (90.22%), Query Frame = 2 Query: 2 AFDVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 AFDVQYGLFKET+DH+LYPNPGSGMIHEQHLQFFHFLG LLAKAMFEGILVDIPFATFFLSKLK+KYNYLNDLPSLDPELYRHLIFLK Y+ DIS+LELYFVILNNEYGE+TEEELLPGG+++RVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLI K+WI+MFNEHE R NTNY GGYH+ HYVI+MFWEV+KSFS ENQKKFLKFVTGCSRGPLLGFKYLEP FCIQRAAGSAS E++DRLPTSATCMNLLKL Sbjct: 728 AFDVQYGLFKETADHMLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGERTEEELLPGGQDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKEWIDMFNEHELQVLISGSVDSLDIDDLRNNTNYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSASNESVDRLPTSATCMNLLKL 1003
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3) HSP 1 Score: 239.58 bits (610), Expect = 1.652e-62 Identity = 126/278 (45.32%), Postives = 177/278 (63.67%), Query Frame = 2 Query: 5 FDVQYGLFKETSDHLLYPNPGSGM-IHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNY--LNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ G FK T++ LLYPNP + M + + + ++FLG +L KA++E +LV++PFA FFLSKL ++ L SLDPE+Y++L+FLK YE D+ EL L F ++NN+ GE EL GGK+I VT+ N I +IHLV+++RLN QIRQ F +G ++ +W+ MF++ E + TNY GGY ++H VI++FW V++ F+ E ++K LKFVT CSR PLLGFK L P FCI L+RLPT++TCMNLLKL Sbjct: 785 FNPNQGFFKTTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEDDVEELGLNFTVVNNDLGEAQVVELKFGGKDIPVTSANRIAYIHLVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCIHNGGSD-----LERLPTASTCMNLLKL 1057
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.681e-62 Identity = 126/278 (45.32%), Postives = 175/278 (62.95%), Query Frame = 2 Query: 5 FDVQYGLFKETSDHLLYPNPGSGM-IHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNY--LNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ G FK T++ LLYPNP + M + + + ++FLG +L KA++E +LV++PFA FFLSKL ++ L SLDPE+YR+L+FLK YE D+ EL L F ++NN+ GE EL GGK+I VT N I +IHLV+++RLN QIR F +G ++ +W+ MF++ E + TNY GGY ++H VI++FW V++ F+ E ++K LKFVT CSR PLLGFK L P FCI L+RLPT++TCMNLLKL Sbjct: 785 FNPNQGFFKTTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEELGLNFTVVNNDLGEAQVVELKFGGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCIHNGGSD-----LERLPTASTCMNLLKL 1057
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.315e-61 Identity = 119/276 (43.12%), Postives = 172/276 (62.32%), Query Frame = 2 Query: 5 FDVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADI-SELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 FD+ YGLF ET HLLYPN + + L+ + FLG+L+ K ++EGI +D FA+FF++K +Y +DL SLDP LY L+FLK+Y+ D+ +++ L F +++ E+G + +L+P G NI VTNEN + +IHLVSN+ LN ++ +Q F GF Q+I W+ MF+E E R++T Y GGY I +FWEVL+ F E+++ F+KFVT +R P+LGFK L P FCI+ + E RLPT++TC+NLLKL Sbjct: 733 FDINYGLFSETKAHLLYPNTHAYAQDVERLRCYEFLGMLIGKCIYEGIQIDAAFASFFVAKWLGHPSYFDDLTSLDPNLYEGLVFLKNYDGDVENDMALNFTVVHEEFGVRNVIDLIPNGSNISVTNENRLQYIHLVSNYYLNARLSRQCRAFTNGFTQIIDPHWLAMFHESEIQILVGGDPVPIDIDDLRRHTVYAGGYEPNSPTIVLFWEVLREFEEEDKRSFVKFVTSVARPPILGFKALMPSFCIR-----VNGEDETRLPTASTCVNLLKL 1003
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.233e-59 Identity = 119/284 (41.90%), Postives = 172/284 (60.56%), Query Frame = 2 Query: 2 AFDVQYGLFKET--SDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSAS------EEALDRLPTSATCMNLLKL 829 AF +YGLF +T SD LL P+P + + E +Q FLG ++ KA++EGIL+D F+ F+ KL +Y+++++L LDPELYR+L+++KHY+ D+ EL L F + G+ + EL PGGK+ VTNEN + +IH +++++LN QI S+ F RG LI W+ +FN HE R+NT Y GGY I++FWEV+K F + LKFVT CSR PLLGFKYL+P F I + + S + ++RLP+++TC N LKL Sbjct: 834 AFATEYGLFSQTPTSDRLLVPSPSARHL-ENGIQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLGRYSFIDELSGLDPELYRNLMYVKHYDGDLKELCLDFTVTEEFCGKMSIIELKPGGKDTSVTNENKMQYIHAMADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQPTFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNTLKL 1116
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.600e-57 Identity = 128/301 (42.52%), Postives = 178/301 (59.14%), Query Frame = 2 Query: 5 FDVQYGLFKETSD-HLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRK-----YNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVL-KSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALD-------------------RLPTSATCMNLLKL 829 FD LFK TS LYP+P S IHE +LQ F F+G +L KA++EGI+VD+PFA+FFLS+L Y+ +++LPSLD E Y++L +K Y+ DIS+L L + G+ EL+PGGK+I VTNEN I++IHL+++ R++ QI+ Q+ F+ GF+ +I+ +WI MF+ E +++T Y GG+H H VI W++L FS E + FLKFVT CSR PLLGF YL+P F I+ S ++ D RLPTS+TC NLLKL Sbjct: 747 FDPALNLFKTTSSGDRLYPSPTS-YIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYDGDISDLGLTLSYDEDVMGQLVCHELVPGGKSIPVTNENKISYIHLMAHFRMHTQIKNQTVAFISGFRSIIRPEWIRMFSAPELQRLISGDNAEIDLDDLKKHTVYYGGFHGSHRVIIWLWDILANDFSSEEKAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKKEPGGRLPTSSTCFNLLKL 1046
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 3.565e-57 Identity = 126/301 (41.86%), Postives = 179/301 (59.47%), Query Frame = 2 Query: 5 FDVQYGLFKETS-DHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRK-----YNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKS-FSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALD-------------------RLPTSATCMNLLKL 829 FD LFK TS D LYP+P S IHE +LQ F F+G +L KA++EGI+VD+PFA+FFLS+L Y+ +++LPSLD E Y++L +K Y+ DI++L L + G+ EL+PGGK I VTNEN I++IHL+++ R++ QI+ Q++ + GF+ +I+ +WI MF+ E +++T Y GG+H H VI W++L S F+ + + FLKFVT CSR PLLGF YL+P F I+ S ++ D RLPTS+TC NLLKL Sbjct: 743 FDPALNLFKTTSGDERLYPSPTS-YIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDITDLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKL 1042
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 1.355e-56 Identity = 125/301 (41.53%), Postives = 179/301 (59.47%), Query Frame = 2 Query: 5 FDVQYGLFKETS-DHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRK-----YNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKS-FSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALD-------------------RLPTSATCMNLLKL 829 FD LFK TS D LYP+P S IHE +LQ F F+G +L KA++EGI+VD+PFA+FFLS++ Y+ +++LPSLD E Y++L +K Y+ DI++L L + G+ EL+PGGK I VT+EN I++IHL+++ R++ QI+ Q++ + GF+ +I+ +WI MF+ E +++T Y GG+H H VI W++L S F+ E + FLKFVT CSR PLLGF YL+P F I+ S ++ D RLPTS+TC NLLKL Sbjct: 745 FDPALNLFKTTSGDERLYPSPTS-YIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQMLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDIADLGLTLSYDEDVMGQLVCHELVPGGKTIPVTDENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKL 1044
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: NEDD4_DROME (E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.274e-38 Identity = 101/282 (35.82%), Postives = 152/282 (53.90%), Query Frame = 2 Query: 5 FDVQYGLFKETS--DHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYL-----EPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 F+ YGLF+ ++ ++ L N GSG+ +E+HL +F F+G + A++ G L+D F F + +K L D+ S+D E Y L+++K E D LEL F + + +G++++ EL PGG NI VTNEN +I LV R ++++Q S FL GF +I + I +F+EHE R+NT Y G YH H +I+ FW + SFS E + + L+FVTG SR P+ GFK L +F I++ + P + TC N L L Sbjct: 708 FNPYYGLFEYSAMDNYTLQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIK--ENDPRILELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKIFDEHE-LELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWG------TPNNFPRAHTCFNRLDL 980
BLAST of FC929480 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 3.469e-36 Identity = 102/273 (37.36%), Postives = 155/273 (56.78%), Query Frame = 2 Query: 38 SDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFA-TFFLSKLKRKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVI-------LNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWINMFNEHEXXXXXXXXXXXXXXXXXRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKL 829 +D PNP S + +HL +F F+G ++AKA+F+G L+D+ F +F+ L K Y +D+ ++DP+ Y++L +L E D+S+ L+L F + + E E T+ EL PGG+NIRVT E ++ LV+ H L IR Q + FL GF +LI ++ +++FN+ E + NT Y Y + VI FWEV+K+FS E+ +FL+FVTG S+ PL GFK L+ + QR + A +RLP++ TC N L L Sbjct: 3388 NDATFQPNPNS-VYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTY-HDIEAVDPDYYKNLKWL--LENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEIDFDDL-KANTEYTS-YTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGAPERLPSAHTCFNQLDL 3654 The following BLAST results are available for this feature:
BLAST of FC929480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929480 ID=FC929480; Name=FC929480; organism=Citrus clementina; type=EST; length=829bpback to top |