FC929528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 3.692e-80 Identity = 139/242 (57.44%), Postives = 171/242 (70.66%), Query Frame = 3 Query: 171 KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AAK+FP+FG +G+ +R RE+AAF QT HETTGGW AP G YAWGYCF+ E +P S YC + YPC GK YYGRGP+QL+WNYNY C ATD VLSFK+A+WFWMT Q PKPSCH+V+T W+PSA D AGRLPGYG+ TN++NGG+ECG+G N V +R+GFF +CG G+ G NLDCY+ G Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLV--ATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 298.516 bits (763), Expect = 3.692e-80 Identity = 137/241 (56.85%), Postives = 168/241 (69.71%), Query Frame = 3 Query: 159 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYH 869 G+L IIS F+D+L +RND CPARGFYTY+AFI AAK+FP FG +G+ R +E+AAFF QT HETTGGW AP G Y+WGYCF E +P S YC + +PC +YYGRGP+QL+WNYNY C A D V++FK+AIWFWMTAQPPKPSCH VI +W+PS D AGRLPGYG+ TNIINGG+ECG+G + V +RIGF+ +C FG+ PG NLDCY+ Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLV--ANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYN 322
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 3.125e-79 Identity = 136/241 (56.43%), Postives = 167/241 (69.29%), Query Frame = 3 Query: 159 GELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYH 869 G+L IISR F+D+L +RND CPARGFYTYDAFI AAK+FP FG +G+ R +EIAAFF QT HETTGGW AP G Y+WGYCF E +P S YC + +PC YYGRGP+QL+WNYNY +C + DPV++FK+AIWFWMT Q PKPSCH VI +W+PS D AGR+PGYG+ TNIINGG+ECG+G + V +RIGF+ +C G+ PG NLDCY+ Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYN 307
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 3.125e-79 Identity = 144/255 (56.47%), Postives = 174/255 (68.24%), Query Frame = 3 Query: 123 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGG--WRDAPGGEYAWGYCFISEISPPSPYCNL--NYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYH 869 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AAK+FPAF +G++ R RE+AAF AQT HETTGG W AP G Y WGYC+ E++P + YC NYPC GK Y+GRGP+QLTWNYNY +C ATDP +SFKSA WFWMT Q PKPSCH+VI W PS +D AGR+PG+GL TNIINGG+ECGQGWN V +RIGF+ +C G+ G NLDCY+ Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNP-ADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLL--ATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYN 308
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 5.331e-79 Identity = 144/264 (54.55%), Postives = 175/264 (66.29%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT HETTGGW AP G YAWGYCF+ E +P S YC+ +PC +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ PKPS H+VIT W PS+ DV A RLPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G NLDCY + G Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNP-STYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLV--ATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFG 316
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 6.962e-79 Identity = 143/255 (56.08%), Postives = 174/255 (68.24%), Query Frame = 3 Query: 138 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGG--WRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTGG W AP G YAWGYC+ E++PPS YC + NYPC GK Y+GRGP+QL+WNYNY +C ++DP +SFKSA WFWMT Q PKPSCH VI W PS++D AGR+PGYG+ TNIINGG+ECG+GWN V +RIGF+ +C G+ G NLDCY+ S G Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLL--SSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFG 316
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.551e-78 Identity = 145/269 (53.90%), Postives = 176/269 (65.43%), Query Frame = 3 Query: 105 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ R REIAAF QT HETTGGW AP G YAWGYCF+ E +P S YC+ +PC +YYGRGPIQ++WNYNY +C ATD V+SFKSA+WFWMTAQ PKPS H+VIT W PS+ DV A RLPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G NLDCY + G Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNP-SAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLV--ATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFG 315
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 292.352 bits (747), Expect = 2.646e-78 Identity = 149/258 (57.75%), Postives = 169/258 (65.50%), Query Frame = 3 Query: 126 GERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPC-RGKYY-GRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGW-NDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HETTGGW DAP G YAWGYC++ EI+ PYC + NY C GK Y GRGPIQL+WNYNY C TDPV+SFK+AIWFWM Q PKPSCH VIT W PSA D+ AGR+PGYG+ TNIINGGIECGQG N A +RIGF+ +C G G NLDCY G Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC--GDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFG 330
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 290.426 bits (742), Expect = 1.005e-77 Identity = 142/255 (55.69%), Postives = 172/255 (67.45%), Query Frame = 3 Query: 138 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGG--WRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTGG W AP G YAWGYC+ E++PPS YC + NYPC GK Y+GRGP+QL+WNYNY +C ++DP +SFKSA WFWMT Q PKPSCH VI W PS++D AGR GYG+ TNIINGG+ECG+GWN V +RIGF+ +C G+ G NLDCY+ S G Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLL--SSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFG 294
BLAST of FC929528 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 288.886 bits (738), Expect = 2.925e-77 Identity = 136/247 (55.06%), Postives = 168/247 (68.02%), Query Frame = 3 Query: 156 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIRPGYNLDCYHNSLLG 884 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T R REIAAFFAQT HETTGGW AP G YAWGYC++ E P YC + +PC KY+GRGPIQ++ NYNY C ATDPV+SFKSA+WFWMT Q PKPSCH+VI W+PSA D A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +C G+ PG NLDC + G Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLV--ATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFG 321 The following BLAST results are available for this feature:
BLAST of FC929528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929528 ID=FC929528; Name=FC929528; organism=Citrus clementina; type=EST; length=954bpback to top |