FC929536

Overview
NameFC929536
Unique NameFC929536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length802
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12500 contig Ccv1_Contig12500:6..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929536 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.459e-78
Identity = 146/240 (60.83%), Postives = 176/240 (73.33%), Query Frame = 1
Query:   94 DQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSLNLTPMADIIPLQIPHVDGLPPGLDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLN----NSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVDGCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLTG 801
            D LHVVMFP+FAFGHISPFVQL+NKLS +GVKVSFF+A GN  R+KS LN  P   I+PL +PHV+GLPPG +ST+E+TP  AELLK ALDLMQPQIKTLLS LKPHFV FDF   WLP +    LGIKTV +SV  A+S A+L  PAR L      SL D+ K P GFP TS+TS+  F ARD+LYV+  F+ GP++Y+R   G+ GC  +  KTC++MEGPY+ +V  QF KPV L G
Sbjct:   10 DALHVVMFPFFAFGHISPFVQLANKLSSYGVKVSFFTASGNASRVKSMLNSAPTTHIVPLTLPHVEGLPPGAESTAELTPASAELLKVALDLMQPQIKTLLSHLKPHFVLFDFAQEWLPKMANG-LGIKTVYYSVVVALSTAFLTCPARVLEPKKYPSLEDMKKPPLGFPQTSVTSVRTFEARDFLYVFKSFHNGPTLYDRIQSGLRGCSAILAKTCSQMEGPYIKYVEAQFNKPVFLIG 248          
BLAST of FC929536 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.525e-12
Identity = 59/245 (24.08%), Postives = 107/245 (43.67%), Query Frame = 1
Query:   79 ESAEADQLHVVMFPWFAFGHISPFVQLSNKLSLHGVKVSFFSAPGNIPRIKSSL--NLTPMADIIPLQIPHV-DGLPPGLDSTSEMTPHMAELLKQALDLMQPQIKTLLSQLKPHFVFFDFTHYWLPGLVGSQLGIKTVNFSVFSAISQAYLVVPARKLNNSLADLMKSPDGFPATSITSLDEFVARDYLYVYTKFNGGPSVYERGIQGVD-GCDVLAIKTCNEMEGPYLDFVRTQFKKPVLLTG 801
            ++   D+  ++M PW A GHI+P ++L+ KLS     + F S P N+     ++  N +    +I LQ+P+    LP    +T  + PH+   L  A +  +P    +L  LKP  V +D     +      Q  I  + F   SA++ ++L      L+N +   +K P        +   +  +++  Y       G    +R ++  +  C  + IKT  E+E  YLD+  +     ++  G
Sbjct:    2 DTKHQDKPSILMLPWLAHGHIAPHLELAKKLSQKNFHIYFCSTPNNLQSFGRNVEKNFSSSIQLIELQLPNTFPELPSQNQTTKNLPPHLIYTLVGAFEDAKPAFCNILETLKPTLVMYDLFQP-MAAEAAYQYDIAAILFLPLSAVACSFL------LHNIVNPSLKYP-----FFESDYQDRESKNINYFLHLTANGTLNKDRFLKAFELSCKFVFIKTSREIESKYLDYFPSLMGNEIIPVG 234          
The following BLAST results are available for this feature:
BLAST of FC929536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UFOG_PETHY3.459e-7860.83Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]
FLRT_CITMA2.525e-1224.08Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]
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Libraries
Library NameType
PhII-IIIV1cdna_library
Properties
Property NameValue
Genbank descriptionKN0AAH1AC08RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1AC08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929536 ID=FC929536|Name=FC929536|organism=Citrus clementina|type=EST|length=802bp
GGCAAGAGAGACACAGAGACCATGCACGCCTCTTCGAACATGCACGCCCC
TTCGAACCAACACCACAAAATGGGAACTGAATCAGCTGAAGCTGATCAGC
TTCACGTGGTGATGTTCCCATGGTTTGCTTTTGGTCACATAAGCCCCTTT
GTACAACTTTCCAACAAGCTCTCACTTCATGGAGTCAAGGTCTCTTTCTT
TTCGGCTCCTGGTAACATTCCCCGCATCAAATCATCGCTCAATTTAACTC
CCATGGCCGACATTATCCCTCTTCAAATCCCACACGTCGATGGCCTCCCT
CCTGGTCTTGATAGCACCTCAGAGATGACACCTCACATGGCTGAGCTCCT
AAAGCAAGCCTTGGACCTCATGCAACCACAAATCAAAACTTTGTTGTCAC
AGCTCAAACCCCATTTTGTGTTCTTTGATTTTACCCATTACTGGTTGCCG
GGTCTTGTTGGTTCTCAACTTGGCATCAAAACAGTTAACTTCTCTGTTTT
CTCTGCCATTTCACAAGCCTATCTCGTGGTTCCCGCCAGGAAACTCAACA
ACAGTTTAGCAGATCTAATGAAATCTCCCGATGGGTTCCCTGCAACTTCC
ATTACCTCGCTCGATGAATTTGTGGCTCGAGATTACTTGTATGTTTATAC
AAAGTTCAATGGCGGCCCGAGTGTTTATGAGAGAGGGATTCAGGGCGTTG
ATGGCTGCGATGTTCTTGCCATCAAGACATGTAATGAAATGGAGGGTCCT
TACCTGGATTTCGTGAGAACCCAGTTCAAGAAACCGGTTCTTCTAACCGG
TC
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