FC929618

Overview
NameFC929618
Unique NameFC929618
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB21_ARATH (FK506-binding protein 2-1 OS=Arabidopsis thaliana GN=FKBP15-1 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.241e-55
Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEKT 471
            + GVKYKP+ CD+QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELG+G VI GWDQGLLG CVGEKRKLKIP+KLGYG  GSPP IPGGATLIFDTELV VNG+P+S  K+
Sbjct:   35 QIGVKYKPQKCDLQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVAVNGEPSSEAKS 149          

HSP 2 Score: 32.7278 bits (73), Expect = 1.241e-55
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 3
Query:   57 AISFLLVLS--TLVSANKSGDVTELQI 131
            A+ FLL+L+  TL  A KSGDVTELQI
Sbjct:   10 AVGFLLLLTILTLAYAKKSGDVTELQI 36          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB22_ARATH (FK506-binding protein 2-2 OS=Arabidopsis thaliana GN=FKBP15-2 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.105e-55
Identity = 98/114 (85.96%), Postives = 105/114 (92.11%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEK 468
            + GVK+KPKTC++QAHKGD IKVHYRGKLTDGTVFDSSFERGDP EF+LGSG VIKGWDQGLLG CVGEKRKLKIPAKLGYG QGSPPTIPGGATLIFDTEL+ VN KPA GE+
Sbjct:   35 QIGVKFKPKTCEVQAHKGDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELIAVNEKPAGGEE 148          

HSP 2 Score: 25.7942 bits (55), Expect = 2.105e-55
Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 3
Query:   63 SFLLVLSTLVS----ANKSGDVTELQIRRKVQAK 152
            S  L+  +L+S    A K+GDV+ELQI  K + K
Sbjct:   10 SLFLIFFSLISLQGFAKKTGDVSELQIGVKFKPK 43          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKB15_VICFA (FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.494e-53
Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEKT 471
            + GVKYKP +C++QAHKGDK+KVHYRGKLTDGTVFDSSFER  PI+FELG G VIKGWDQGLLGMC+GEKRKLKIPAKLGYG QGSPPTIPGGATLIFDTELV VN K  S EK+
Sbjct:   32 QIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKS 146          

HSP 2 Score: 26.9498 bits (58), Expect = 2.494e-53
Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 3
Query:   39 VLNIAAAISFLLVLSTLVSANKSGDVTELQI 131
            + +I    +  ++ S LV+A  + DVTELQI
Sbjct:    3 LFSIFLIFTIFIIASALVAAKSAADVTELQI 33          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_DICDI (FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.634e-33
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            + GVKY+P  C ++   GDK+K+HY G L +G  FDSS +RG P EF++G G VIKGWDQG+LGMCVGEKRKL IP  LGYG QG+   IPG + LIFD EL+ +N
Sbjct:   28 QIGVKYRPDECTVKTKSGDKLKIHYTGTLLNGDKFDSSVDRGTPFEFKIGVGQVIKGWDQGVLGMCVGEKRKLIIPPSLGYGQQGAGDKIPGNSHLIFDVELIGIN 133          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_MOUSE (FK506-binding protein 2 OS=Mus musculus GN=Fkbp2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.521e-32
Identity = 63/105 (60.00%), Postives = 79/105 (75.24%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            + GVK +   C I++ KGD + +HY GKL DGT FDSS  +  P  F LG+G VIKGWDQGLLGMC GEKRKL IP++LGYG +G+PP IPGGATL+F+ EL+ +
Sbjct:   30 QIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 134          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_HUMAN (FK506-binding protein 2 OS=Homo sapiens GN=FKBP2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.521e-32
Identity = 63/105 (60.00%), Postives = 79/105 (75.24%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            + GVK +   C I++ KGD + +HY GKL DGT FDSS  +  P  F LG+G VIKGWDQGLLGMC GEKRKL IP++LGYG +G+PP IPGGATL+F+ EL+ +
Sbjct:   32 QIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 136          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_BOVIN (FK506-binding protein 2 OS=Bos taurus GN=FKBP2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.521e-32
Identity = 63/105 (60.00%), Postives = 79/105 (75.24%), Query Frame = 1
Query:  127 RFGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            + GVK +   C I++ KGD + +HY GKL DGT FDSS  +  P  F LG+G VIKGWDQGLLGMC GEKRKL IP++LGYG +G+PP IPGGATL+F+ EL+ +
Sbjct:   30 QIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 134          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica GN=FPR2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.616e-32
Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 1
Query:  139 KYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 444
            K  P+ C  +A KGD + VHY GKL DGTVFDSS ERG PI+F LG+G VI GWDQG+LGMCVGEKRKL IP  L YG QG+   IP  +TLIF TELV+++
Sbjct:   35 KISPEECTQKARKGDTVSVHYTGKLEDGTVFDSSVERGQPIQFPLGTGRVIPGWDQGILGMCVGEKRKLTIPPHLAYGKQGAGRVIPPDSTLIFTTELVSID 136          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_CRYNE (FK506-binding protein 2 OS=Cryptococcus neoformans GN=FPR2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.967e-30
Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 1
Query:  118 QSYRFGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 450
            +  + GVKY P+ C +++ KGD++ +HY G L  DG+ FDSS +R  P EF LG+G VIKGWDQGLL MC+ EKRKL IP+ L YG +G PP IP  +TL+F+ EL+ +  +
Sbjct:   25 EQLQIGVKYVPEECPVKSRKGDRLSMHYTGTLAKDGSKFDSSLDRNRPFEFTLGAGQVIKGWDQGLLDMCISEKRKLTIPSHLAYGERGHPPVIPPQSTLVFEVELLGIKNR 136          
BLAST of FC929618 vs. ExPASy Swiss-Prot
Match: FKBP2_YEAST (FK506-binding protein 2 OS=Saccharomyces cerevisiae GN=FKB2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.998e-29
Identity = 63/96 (65.62%), Postives = 72/96 (75.00%), Query Frame = 1
Query:  157 CDIQAHKGDKIKVHYRGKLTD-GTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 441
            C I+A  GDK+KVHY G L + GTVFDSS+ RG PI FELG G VIKGWDQG+ GMCVGEKRKL+IP+ L YG +G P  IP  A L+FD ELV V
Sbjct:   36 CLIKAMPGDKVKVHYTGSLLESGTVFDSSYSRGSPIAFELGVGRVIKGWDQGVAGMCVGEKRKLQIPSSLAYGERGVPGVIPPSADLVFDVELVDV 131          
The following BLAST results are available for this feature:
BLAST of FC929618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
FKB21_ARATH1.241e-5583.48FK506-binding protein 2-1 OS=Arabidopsis thaliana ... [more]
FKB22_ARATH2.105e-5585.96FK506-binding protein 2-2 OS=Arabidopsis thaliana ... [more]
FKB15_VICFA2.494e-5382.61FK506-binding protein 2 OS=Vicia faba GN=FKBP15 PE... [more]
FKBP2_DICDI6.634e-3359.43FK506-binding protein 2 OS=Dictyostelium discoideu... [more]
FKBP2_MOUSE2.521e-3260.00FK506-binding protein 2 OS=Mus musculus GN=Fkbp2 P... [more]
FKBP2_HUMAN2.521e-3260.00FK506-binding protein 2 OS=Homo sapiens GN=FKBP2 P... [more]
FKBP2_BOVIN2.521e-3260.00FK506-binding protein 2 OS=Bos taurus GN=FKBP2 PE=... [more]
FKBP2_YARLI5.616e-3263.73FK506-binding protein 2 OS=Yarrowia lipolytica GN=... [more]
FKBP2_CRYNE8.967e-3051.79FK506-binding protein 2 OS=Cryptococcus neoformans... [more]
FKBP2_YEAST1.998e-2965.63FK506-binding protein 2 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1AG03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929618 ID=FC929618; Name=FC929618; organism=Citrus clementina; type=EST; length=741bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTCGGCGTAAAGTACAAGCCA
AAAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTA
CCGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAG
GTGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGG
GACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAAT
TCCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAG
GTGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAA
CCAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTG
AGCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAAC
CAGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAA
CAATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATAT
TAATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGA
ACATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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