FC929648

Overview
NameFC929648
Unique NameFC929648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length815
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig982 contig Ccv1_Contig982:17..831. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 51/154 (33.12%), Postives = 75/154 (48.70%), Query Frame = 3
Query:  132 SEMESGYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIQAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHDYHAKDHPRY-----EKEFVLCCI 572
            + +  G++F P+D             N  F    I   D I   EPWDLP +SK  S D  + FF     KY N ++ +R TE G WK T KD +I+ G+ + G KK L ++  R P  +   +T+WV+H+Y   D         ++ +VLC I
Sbjct:    7 TSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTD-IYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGE---RTNWVMHEYRLSDEDLKKAGVPQEAYVLCRI 156          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.344e-13
Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = 3
Query:  231 IKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIQAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHDYHAKDH-----PRYEKEFVLCCIT 575
            I ++D I   EPWDLP +    ++D  + FF     KY N +R +R T AG WK T KD  I+ G    GTKK L F+  R P  +   +T+W++H+Y+  +      P  +  +VLC IT
Sbjct:   41 IPEVD-IYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGR---RTEWIMHEYYIDERECQACPDMKDAYVLCRIT 157          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.222e-13
Identity = 42/146 (28.77%), Postives = 67/146 (45.89%), Query Frame = 3
Query:  135 EMESGYKFQPSDXXXXXXXXXXXXNPHFSHHPIKDIDHI--CSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIQAGNGLTGTKKFLTFYCRGPDSKVPVKTDWVVHDYHAKDHPRYEKEFVLC 566
            E   G +F P+D            +   + H  + I+ +  C L+PW+LP +S+   +D  + FF     KY   ++  R+T++G WK T +   I       G KK L FY     +    K+DWV+H+YH   H +    + LC
Sbjct:    2 ETPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMRNRQQIGEKKILMFY-----TSKESKSDWVIHEYHGFSHNQMMMTYTLC 142          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.907e-13
Identity = 49/147 (33.33%), Postives = 67/147 (45.58%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXXNPHFSHHP---IKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIQAGNG---LTGTKKFLTFYCRGPDSKVPVKTDWVVHDYHAKD-HPRYEKEFVLC 566
            G++F+P+D                + H    I  +D ICS EPWDLP++S   S D V+ FF     KY   ++  RRT +G WK T K   +    G     G K+ L F  R        KTDWV+H+YHA    P     + +C
Sbjct:    6 GFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVD-ICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDGS-----KTDWVMHEYHATSLFPNQMMTYTVC 146          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.421e-12
Identity = 44/153 (28.76%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  246 HICSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQI---QAGNGLTGTKKFLTFYCRGPDSKVP--VKTDWVVHDYHAKDHPRYEKEFVLCCITNGEASAYVDDGSETNTADNDA*VEERSVILSSLQTIIK 689
            +ICS +P  LP+ SK  S+D V+ FF    Y         R T +G WK T  D +I   +   G  G KK L +Y    + +VP  V T WV+H+YH    P+ ++ +V+C +        V  G   ++  + + V + + + ++  T ++
Sbjct:   41 NICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYY----EGRVPKGVWTPWVMHEYHITCLPQDQRNYVICQVMYKGEDGDVPSGGNNSSEPSQSLVSDSNTVRATSPTALE 189          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPR-YKYRNSNRVDRRTEAGQWKITSKDSQIQAGNGLTGTKKFLTFYCRGPDSKVP--VKTDWVVHDYHAKDHPRYE-----KEFVLCCI 572
            G++F P+D               HFS   I DID +   +PWDLP+++    ++    +F+ PR  KY N +R +R   +G WK T  D  I A     G KK L FY      K P   KT+W++H+Y   +H R        ++VLC I
Sbjct:   17 GFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDID-LYKFDPWDLPSKALFGEKEW---YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYA----GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRI 159          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 47/147 (31.97%), Postives = 67/147 (45.58%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXXNPHFSHHP---IKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIQAGNG---LTGTKKFLTFYCRGPDSKVPVKTDWVVHDYHAK-DHPRYEKEFVLC 566
            G++F+P+D                + H    I  +D ICS +PWDLP+ S+  + DQV+ FF     KY   +R  R+T++G WK T     I    G     G K+ L F   G       K+DW +H+YHA    P     + LC
Sbjct:    6 GFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVD-ICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGGS-----KSDWAMHEYHATFSSPNQIMTYTLC 146          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11
Identity = 51/130 (39.23%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  147 GYKFQPSDXXXXXXXXXXXX--NPHFSHHPIKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPR-YKYRNSNRVDRRTEAGQWKITSKDSQIQA--GNGLTGTKKFLTFYCRGPDSKVPVKTDWVVHDY 521
            G++F P+D              NP  S   I+ +D I   +PWDLP  + T  ++    +FY PR  KYRNS+R +R T AG WK T  D  I +  GN   G KK L FY +G  +K  VKTDW++H++
Sbjct:   19 GFRFHPTDEELVSFYLKRKVQHNP-LSIELIRQLD-IYKYDPWDLPKFAMTGEKEW---YFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFY-KGRAAK-GVKTDWMMHEF 141          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11
Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  132 SEMESGYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPR-YKYRNSNRVDRRTEAGQWKITSKDSQIQAGNGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHDYHAKDHPR---YEKEFVLC 566
            S +  G++F P+D             +       IKDID +  +EPWDL    K   E+Q   +F+  +  KY    R +R T+AG WK T +D  I   + L G +K L FY  R P+ +   K+DW++H+Y  +        E+ +V+C
Sbjct:    5 SHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDID-LYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQ---KSDWIMHEYRLETDENGTPQEEGWVVC 151          
BLAST of FC929648 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11
Identity = 55/166 (33.13%), Postives = 79/166 (47.59%), Query Frame = 3
Query:  132 SEMESGYKFQPSDXXXXXXXXXXXX-NPHFSHHPIKDIDHICSLEPWDLPTESKTDSEDQVF*FFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIQAG--NGLTGTKKFLTFY-CRGPDSKVPVKTDWVVHDYHAKDHPRY-------EKEFVLC--CITNGEAS 590
            S M  G++F P+D             + +FS   I  +D +   EPW+LP ++K   ++  F F    R KY    R +R TEAG WK T KD +I++     L G KK L FY  R P  +   K+ WV+H+Y       Y       + E+VLC  C+ +G  S
Sbjct:   18 SLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVD-LNKSEPWELPEKAKMGEKEWYF-FTLRDR-KYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGE---KSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVS 177          
The following BLAST results are available for this feature:
BLAST of FC929648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NAC78_ARATH6.168e-1433.12NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ2.344e-1337.19NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC3_ARATH5.222e-1328.77NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NAC4_ARATH8.907e-1333.33NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC69_ARATH4.421e-1228.76NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC72_ARATH5.774e-1233.11NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC5_ARATH5.774e-1231.97NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC9_ARATH2.865e-1139.23Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC7_ARATH2.865e-1131.13NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC54_ARATH6.383e-1133.13Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DF01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929648 ID=FC929648; Name=FC929648; organism=Citrus clementina; type=EST; length=815bp
ATCACACACTCACACTCACACTCACTCTTTGGGTCTCCACTGTAACTGTT
CTGAATTAGTACCAGTCTTGAGGGGTTTCATCACATCACTACCAGCAATT
GAAGAACTGGTTATTGTAAAAAAAAAAAAAATCTGAAATGGAGAGTGGGT
ATAAATTCCAGCCATCTGATGAACTAATCCTCCGTCTTCTCAAGGAGAAG
AGGCTTAACCCCCATTTCTCACATCATCCTATCAAAGATATTGATCATAT
CTGCAGCCTTGAGCCATGGGACTTACCAACGGAATCAAAAACTGACTCTG
AGGATCAAGTTTTTTAATTTTTCTATGAACCTCGTTACAAGTACAGGAAC
AGTAACCGGGTCGACAGAAGAACAGAAGCAGGGCAATGGAAAATTACCAG
TAAAGATTCCCAAATCCAAGCTGGAAACGGCCTTACCGGTACAAAAAAGT
TCTTGACTTTCTACTGCCGTGGTCCTGATTCTAAGGTACCAGTTAAGACC
GACTGGGTTGTGCATGACTACCATGCCAAGGACCACCCCCGTTATGAGAA
GGAATTTGTTCTGTGTTGCATAACAAATGGAGAAGCTTCAGCTTATGTAG
ATGATGGCAGTGAGACAAACACTGCTGACAACGATGCATGAGTGGAAGAA
CGTTCTGTAATCTTAAGTAGCTTGCAAACAATTATAAAATCCTCTTACGA
GGAAAGTACTGTAATTTTAACGAGGCATGCAAACAATTATGAAATCCTCT
TATGAGGAAAGTACTGTAATCTTAAGCATCATTGTAAAGAACTATGAAAT
CCTCTTACGAGGAAA
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