FC929653

Overview
NameFC929653
Unique NameFC929653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15026 contig Ccv1_Contig15026:1..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA9_ARATH (Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 5.237e-74
Identity = 141/175 (80.57%), Postives = 157/175 (89.71%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL+MGI  TEVAK SS+IIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVA+L+IN VAA+SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLMHR+PVGR EPLITNIMWRNLL+Q+ YQV+VLLVLNF G  IL L  ++ AH+  V NT IFN+FV+CQ+
Sbjct:  812 EADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQI 986
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA8_ARATH (Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.876e-73
Identity = 144/174 (82.76%), Postives = 152/174 (87.36%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQ 756
            +ADIGL MGI  TEVAK SS+IIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVA+LVIN VAA+SSGDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGR EPLITNIMWRNLLIQA YQVSVLL LNF+G  IL LE +   H+  V NT IFN+FVLCQ
Sbjct:  795 EADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQ 968
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA10_ARATH (Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 3.512e-70
Identity = 139/175 (79.43%), Postives = 154/175 (88.00%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGIQ TEVAK  S+IIILDDNF SVVKVVRWGRSVYANIQKFIQFQLTVNVA+LVIN VAA+S+G+VPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGR EPLITNIMWRNL IQA YQV+VLL+LNF+G  IL+L+S  +A    V NT IFN+FV+CQV
Sbjct:  799 EADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNA--ERVKNTVIFNAFVICQV 971
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA13_ARATH (Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.803e-65
Identity = 129/175 (73.71%), Postives = 147/175 (84.00%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL+MGIQ TEVAK SS+I+ILDDNFASV  V++WGR VY NIQKFIQFQLTVNVA+LVINFVAAVS+GDVPL AVQLLWVNLIMDTLGALALATE PT+ LM + P+GR+ PLITNIMWRNLL QA YQ+SVLLVL F+G+ I N+       +  V NT IFN+FVLCQV
Sbjct:  757 EADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNV-------TEKVKNTLIFNTFVLCQV 924
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA12_ARATH (Putative calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.005e-62
Identity = 121/175 (69.14%), Postives = 146/175 (83.43%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL+MGIQ TEVAK SS+I+ILDDNFASV  V++WGR VY NIQKFIQFQLTVNVA+LVINF+AA+S+G+VPL AVQLLWVNLIMDTLGALALATE PT+ L+ R PVGR E LITN+MWRNLL+Q+ YQ++VLL+L F+G  I ++  +       V +T IFN+FVLCQV
Sbjct:  761 EADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKE-------VKDTLIFNTFVLCQV 928
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA11_ARATH (Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.296e-56
Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK ++++II+DDNFA++V V +WGR+VY NIQKF+QFQLTVNV +L+INFV+A  +G  PL AVQLLWVN+IMDTLGALALATEPP + LM R P+GR    IT  MWRN++ Q+ YQ+ VL +LNF GK+ILNL       S  V NT IFNSFV CQV
Sbjct:  756 EADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPD---STIVLNTIIFNSFVFCQV 927
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA2_ORYSJ (Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.399e-56
Identity = 107/175 (61.14%), Postives = 137/175 (78.29%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK S++++ILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV +L++NF +A  +GD PL AVQLLWVN+IMDTLGALALATEPP ++LM ++PVGR    ITN+MWRN++ Q+ YQ +V+  L  QGK +  LE     H++ V NT IFN+FV CQV
Sbjct:  772 EADIGLAMGIAGTEVAKESADVVILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTSACFTGDAPLTAVQLLWVNMIMDTLGALALATEPPNNNLMKKAPVGRKGKFITNVMWRNIVGQSLYQFAVMWYLQTQGKHLFGLEG---YHADIVLNTIIFNTFVFCQV 943
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA5_ORYSJ (Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.168e-55
Identity = 107/175 (61.14%), Postives = 135/175 (77.14%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK S+++I+LDDNF +++ V RWGR+VY NIQKF+QFQLTVN+ +LVINFV+A  +G  PL AVQLLWVN+IMDTLGALALATEPP D +M R PV + E  IT +MWRN++ Q+ YQ+ VL  L F G+ +LN++    A S ++ NT IFNSFV CQV
Sbjct:  746 EADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIKG---ADSKSIINTLIFNSFVFCQV 917
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA4_ORYSJ (Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.168e-55
Identity = 108/175 (61.71%), Postives = 134/175 (76.57%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK S+++I+LDDNF +++ V RWGR+VY NIQKF+QFQLTVN+ +LVINFV+A   G  PL AVQLLWVN+IMDTLGALALATEPP D +M R PV + E  IT  MWRN++ Q+ YQ+ VL  L F G+R+LN++    A S ++ NT IFNSFV CQV
Sbjct:  768 EADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLLNIKG---ADSKSIINTLIFNSFVFCQV 939
[Close]
BLAST of FC929653 vs. ExPASy Swiss-Prot
Match: ACA1_ORYSJ (Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.110e-55
Identity = 109/175 (62.29%), Postives = 132/175 (75.43%), Query Frame = 1 
Query:  235 QADIGLTMGIQRTEVAK*SSNIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVASLVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRIEPLITNIMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSDAHSNTV*NTQIFNSFVLCQV 759
            +ADIGL MGI  TEVAK S+++IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV +L++NF +A  +G+ PL AVQLLWVN+IMDTLGALALATEPP D LM R PVGR    ITN+MWRN+L Q+ YQ  V+  L  QGK +  L+      +  V NT IFNSFV CQV
Sbjct:  768 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNILGQSFYQFIVMWYLQTQGKSMFGLDGPD---AEVVLNTIIFNSFVFCQV 939
The following BLAST results are available for this feature:
BLAST of FC929653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
ACA9_ARATH5.237e-7480.57Calcium-transporting ATPase 9, plasma membrane-typ... [more]
ACA8_ARATH9.876e-7382.76Calcium-transporting ATPase 8, plasma membrane-typ... [more]
ACA10_ARATH3.512e-7079.43Calcium-transporting ATPase 10, plasma membrane-ty... [more]
ACA13_ARATH5.803e-6573.71Putative calcium-transporting ATPase 13, plasma me... [more]
ACA12_ARATH6.005e-6269.14Putative calcium-transporting ATPase 12, plasma me... [more]
ACA11_ARATH1.296e-5663.43Putative calcium-transporting ATPase 11, plasma me... [more]
ACA2_ORYSJ8.399e-5661.14Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA5_ORYSJ4.168e-5561.14Probable calcium-transporting ATPase 5, plasma mem... [more]
ACA4_ORYSJ4.168e-5561.71Probable calcium-transporting ATPase 4, plasma mem... [more]
ACA1_ORYSJ7.110e-5562.29Calcium-transporting ATPase 1, plasma membrane-typ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DF06RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2DF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929653 ID=FC929653; Name=FC929653; organism=Citrus clementina; type=EST; length=809bp
GATGGCACTAATGATGCTCCTGCCCTACATGAGGTGAAATGGATGTGATT
CTACTTTGATATTTTATATTCTTACATGACAGTGTATTTAAAATTTCTGT
TTCATCGTCAATGTTTTTAAATCATCTGGACTACTAAAACAGTTTCGTAT
TGGAGTTAAACAAGTCAGGGTAGGTCCTGGCAACATGCACTAAATATGAT
ATTATAGCTAACGGAATTAAGTCATTTTGAAATTCAAGCAGACATTGGTC
TGACAATGGGTATTCAAAGAACCGAGGTTGCTAAATAGAGCTCAAATATT
ATTATCTTGGACGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGG
TCGTTCTGTATATGCAAATATCCAGAAATTCATCCAGTTTCAACTTACTG
TCAATGTCGCATCTCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGT
GATGTTCCCCTCAATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGA
TACCCTGGGAGCCTTAGCCTTGGCTACTGAACCACCAACTGATCACCTGA
TGCATAGGTCCCCAGTTGGTCGAATAGAACCTCTTATAACTAATATAATG
TGGAGGAATCTCTTAATACAGGCTTCCTACCAAGTAAGTGTCCTGCTTGT
CCTGAATTTTCAAGGGAAGAGGATTCTGAACCTGGAGAGTGATTCCGATG
CCCATTCCAACACAGTATAAAATACTCAGATATTCAATTCTTTTGTCCTT
TGCCAGGTTAGTAAATTATCACGGAATACAATAATTTGTTAAGTCGAGCT
TCTGTTTGT
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