FC929715

Overview
NameFC929715
Unique NameFC929715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15049 contig Ccv1_Contig15049:1..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC929715 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.153e-29
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 2 
Query:  341 MGGGNGHKSKMAREKNMDKQKTPGEGSHLESNKKAMSIQCKVCMQTFICTTSEVKCNEHA*SKHPKSDLFTCFPHLKK 574
            MGGGN  KS MAR KN++K K  G+GS LE+NKKAMSIQCKVCMQTFICTTSEVKC EHA +KHPK+D+  CFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of FC929715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH1.153e-2975.64Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH1BD07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929715 ID=FC929715; Name=FC929715; organism=Citrus clementina; type=EST; length=737bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAACTCACTCCCCCTT
ACCTGAATATATCCCAATACTACAAATAACATTCAACACCTGGGTATTTA
CGTAAAATTACCGGGAACCCTTCCCTTAAAACCCCCCATGAACTTTCTAC
TTAGTATCAAAAACTAAATACATCATAAAATGAACACACAAACAAAAAAA
CCACATTTTAAACCCACATATCCAAGTGAACAAAAAAAAACTAATCACCG
GAGTCGCCTCGTGCCGAATTCGGCACGAGGTTTGGGTATTTTTATTCGAA
ACTTAACAATTCCTGTTAACTTCCGTGGTTTGTAAAGGAAATGGGAGGCG
GCAACGGCCATAAATCAAAAATGGCTCGTGAAAAAAACATGGACAAGCAA
AAAACACCTGGCGAGGGGAGTCATCTGGAGTCAAACAAAAAAGCCATGTC
CATCCAATGCAAGGTATGCATGCAGACGTTCATTTGCACCACATCTGAGG
TGAAGTGCAACGAACATGCCTAATCCAAACACCCCAAATCTGATTTATTT
ACATGTTTCCCCCATTTAAAGAAATGAAAAACCAATAATTTGATTATGTA
TTTGGACATGGGTTTAAAGCCCTCCTCAATATGTGTCTTGCTGTGGGTAA
AAATTAAAAAGATTTTGGGAATAAGAGGAATCCTTCCGCTCTTATCAATA
CTAATAATTACCTATTTGCAAGAAAAAAAAAAAAAAA
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