FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:765..1476. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 402.519 bits (1033), Expect = 1.131e-111
Identity = 195/236 (82.63%), Postives = 216/236 (91.53%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            GQEY+ELLHEFMTAVKQNYGE++LIQFEDF NHNAFDLL KYGTTHLVFNDDIQGTA+VVLAGLISA+K LGGSLAD  FLFLGAGEAGTGIAELIALE+S+++  PLEETRKKIWL DSKGLIVSSR ESLQHFKKPWAHEHEPVK L++ V AIKP +LIGTSG G+TFTKEV+EAMAS NEKP+I +LSNPTSQSECTA+EAYTW++G+AIFASGSPFDP EY   VFVPGQ+
Sbjct:  255 GQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGEAGTGIAELIALEMSRRSKTPLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQS 490          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 3.290e-111
Identity = 193/236 (81.78%), Postives = 217/236 (91.95%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            GQEYAEL++EFM+AVKQNYGE +LIQFEDF NHNAFDLLEKY TTHLVFNDDIQGTASVVL GLISA+K +GGSLADQ+FLFLGAGEAGTGIAELIALEISKQTN+PLEE+RKK+WLVDSKGLIV SRL+SLQHFKKPWAH+HEPV E +DA+  I+PT+LIG+SG G+TFTKEVVE M+SLNEKPII +LSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EY   ++V GQA
Sbjct:  312 GQEYAELMNEFMSAVKQNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLGGLISALKLVGGSLADQKFLFLGAGEAGTGIAELIALEISKQTNIPLEESRKKVWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQA 547          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 3.290e-111
Identity = 195/236 (82.63%), Postives = 217/236 (91.95%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+EYAEL++EFM+AVKQNYGE++LIQFEDF NHNAFDLLEKY TTHLVFNDDIQGTASVVLAGLISA+K +GGSLAD +FLFLGAGEAGTGIAELIALEISKQTN PLEETRKKIWLVDSKGLIV SRL+SLQHFKKPWAH+HEPV + +DAV AIKPT+LIG+SG G+TFTKEVVEAM+S NEKPII +LSNPTSQSECTAE+AYTWS+GR IFASGSPF P EY   V+V GQ+
Sbjct:  311 GKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGAGEAGTGIAELIALEISKQTNAPLEETRKKIWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQS 546          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.102e-110
Identity = 192/236 (81.36%), Postives = 215/236 (91.10%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            GQEYA  L EFM AVKQNYGE++L+QFEDF NHNAFDLLEKY ++HLVFNDDIQGTASVVLAGL++++K +GG+LAD  FLFLGAGEAGTGIAELIA+E+SKQT  P+EETRKKIWLVDSKGLIVSSRLESLQ FKKPWAHEHEPVK L++AV AIKPT+LIG+SG G+TFTKEVVE MASLNEKP+I +LSNPTSQSECTAEEAYTWS+GRAIFASGSPFDP EY   +FVPGQA
Sbjct:  253 GQEYATFLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIAVEVSKQTKAPVEETRKKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQA 488          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.805e-109
Identity = 189/236 (80.08%), Postives = 212/236 (89.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+EY+E L EFM+ VKQNYGE++LIQFEDF NHNAFDLL KYGTTHL FNDDIQGTASVVLAG++SA++ LGG+LAD +FLFLGAGEAGTGIAELIALE+SKQT  P+EETRKKIWLVDSKGLIV SR +SLQ FKKPWAHEHEPVK+L+DAV  IKPT+LIG+SG G+ FTKEV+EAMAS NEKP+I +LSNPTSQSECTAEEAYTW+QGRAIFASGSPFDP EY    FVPGQA
Sbjct:  255 GKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKQTKCPIEETRKKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQA 490          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.689e-107
Identity = 187/236 (79.24%), Postives = 215/236 (91.10%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            GQEY+ELL EFM AVKQNYGE++LIQFEDF NHNAF+LL KYGT+HLVFNDDIQGTASVVLAGL++A+  +GGSL++  FLFLGAGEAGTGIAELIALE+SKQT +PLEETRKKIW+VDSKGLIV SR+E LQHFK+PWAH+HEPV+ELV+AV +IKPT+LIG+SG GRTFTKEVV+AMA+ NEKPIIF+LSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EY   V+  GQA
Sbjct:  238 GQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQA 473          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 4.916e-107
Identity = 186/236 (78.81%), Postives = 212/236 (89.83%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+EYAE + EFM+AVKQNYGE+IL+QFEDF NHNAF+LLEKY TTHLVFNDDIQGTASVVLAGLI+++K LGG+LAD +FLFLGAGEAGTGIAELIALE+SK+T  P+E+ RKKIWLVDSKGL+VSSR E+LQ FK PWAHEHEP+  L+DAV AIKPT+LIGTSG+G+ FTKEVVEAMA++N KP+I +LSNPTSQSECTAEEAYTWSQG AIFASGSPFDP EY    FVPGQA
Sbjct:  249 GEEYAEFVQEFMSAVKQNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQGTASVVLAGLIASLKLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKKTKAPVEQMRKKIWLVDSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQA 484          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 9.270e-106
Identity = 185/236 (78.39%), Postives = 210/236 (88.98%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+EY EL+ EFM+AVKQ YGE++LIQFEDF NHNAFDLLEKY  +HLVFNDDIQGTASVVLAGL++A+K +GG+LA+Q +LFLGAGEAGTGIAELIALEISKQTN P+EE RKK+WLVDSKGLIV SR  SLQ FKKPWAHEHEP+K L DAV +IKPT+LIGTSG GRTFTKE++EAM+S NE+PIIFSLSNPTS SECTAE+AYTWSQGR+IFASGSPF P EY    FVPGQ+
Sbjct:  300 GEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGIAELIALEISKQTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQS 535          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 379.407 bits (973), Expect = 1.025e-104
Identity = 182/236 (77.12%), Postives = 209/236 (88.56%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQA 712
            G+EY EL+ EFM+AVKQ YGE++LIQFEDF NHNAFDLL KY  +HLVFNDDIQGTASVVLAGL+S++K +GG+LA+  +LFLGAGEAGTGIAELIALEISKQT  P+EE RKK+WL+DSKGLIV+SR ESLQ FKKPWAHEHEPV  L+DAV +IKPT+LIGTSG G+TFTKEV+EAMAS NE+P+IFSLSNPTS SECTAEEAY WSQGRA+FASGSPFDP EY   + VPGQ+
Sbjct:  303 GKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEISKQTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQS 538          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.146e-63
Identity = 129/236 (54.66%), Postives = 162/236 (68.64%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQ 709
            G EY + L EFM AV   YG   LIQFEDF N NAF LL+KY   +  FNDDIQGTASV +AG+++A++     L+DQ  LF GAGEA  GIA LI + + K+  +P E+  KKIWLVDSKGLIV  R  +L + K+ +AHEHE +K L   V  IKPT LIG +  G  F++++++ MA+ NE+PIIF+LSNPTS++ECTAE  YT +QGRAIFASGSPFDP          PGQ
Sbjct:  204 GPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAMEKE-GVPKEKAIKKIWLVDSKGLIVKGRA-ALTNEKEEFAHEHEEMKNLEAIVQDIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECTAERGYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQ 437          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAOX_POPTR1.131e-11182.63NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLATR3.290e-11181.78NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_FLAPR3.290e-11182.63NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU8.102e-11081.36NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_VITVI1.805e-10980.08NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_SOLLC1.689e-10779.24NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_MESCR4.916e-10778.81NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_MAIZE9.270e-10678.39NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_ORYSJ1.025e-10477.12NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_PIG1.146e-6354.66NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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