FC929868

Overview
NameFC929868
Unique NameFC929868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15056 contig Ccv1_Contig15056:1..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.737e-67
Identity = 122/191 (63.87%), Postives = 144/191 (75.39%), Query Frame = 2
Query:  146 MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            MFGR P++S+NTKYYE+LGVSK+AT ++LKKAYRKAA+KNHPDKGGDPEKFKE+GQAYEVL+DPEKR+IYDQYGE+ LKEGMGG G  H+PFDIF+                   ++GEDVVH LKVSLEDLYNGT+KKLSLSRN+LC                  CQG+GMK++ RQ+G GMIQQMQH C
Sbjct:    1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLGPGMIQQMQHPC 191          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.178e-65
Identity = 123/191 (64.40%), Postives = 144/191 (75.39%), Query Frame = 2
Query:  146 MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            MFGR P++S+NTKYYEILGVSK+A++D+LKKAYRKAA+KNHPDKGGDPEKFKEL QAYEVLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF+                   ++GEDV+H LKVSLEDLYNGT+KKLSLSRN++C                 GCQG+GMK++ R +G  MIQQMQH C
Sbjct:    1 MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPC 189          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.066e-64
Identity = 118/191 (61.78%), Postives = 139/191 (72.77%), Query Frame = 2
Query:  146 MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            MFGR P++S++T+YYEILGV K A+ ++LKKAY+KAA+KNHPDKGGDPEKFKEL  AYEVLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF+                   ++GEDVVH LKVSLEDL+ GTTKKLSLSRN++C                 GCQGTGMK++ R +G  MIQQMQH C
Sbjct:    1 MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPC 191          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 9.863e-63
Identity = 121/192 (63.02%), Postives = 138/192 (71.88%), Query Frame = 2
Query:  146 MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            MFGR P R+S+NTK+YEILGV K+A  ++LKKAY+KAA+KNHPDKGGDPEKFKEL QAYEVLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF                    ++GEDVVH LKVSLED+Y GTTKKLSLSR  LC                 GCQG+GMKI+ RQ G GM+QQ+QH C
Sbjct:    1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHAC 192          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.682e-62
Identity = 122/192 (63.54%), Postives = 140/192 (72.92%), Query Frame = 2
Query:  146 MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            MFGR P ++S+NTK+YEILGV KSA+ ++LKKAY+KAA+KNHPDKGGDPEKFKEL QAYEVLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF                    ++GEDVVH LKVSLED+Y GT KKLSLSRN LC                 GCQG+GMK++ RQ+G GMIQQMQH C
Sbjct:    1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFS-SFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHAC 191          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.014e-56
Identity = 106/170 (62.35%), Postives = 124/170 (72.94%), Query Frame = 2
Query:  209 KSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            K+A+ D+LKKAYRKAA+KNHPDKGGDPEKFKEL QAY+VLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF+                   ++GEDVVH LKVSLE+LYNGT+KKLSLSRN++C                  CQG+GMK++ RQ+G GMIQQMQH C
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPC 170          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.364e-40
Identity = 88/181 (48.62%), Postives = 116/181 (64.09%), Query Frame = 2
Query:  179 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            T+YY+ILGV  SA+ +E+KKAYRK A+K HPDK  D  EKFK + QAYEVLSDP+KRD+YDQ GE A+KEG  G+ +  +P DIF+                   ++G++VVH L V+LEDLYNG TKKL+L +N++C                  C+G GM+I  +QIG GM+QQ+Q VC
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDIFD-------MFFGGGGRMARERRGKNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVC 178          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40
Identity = 88/181 (48.62%), Postives = 116/181 (64.09%), Query Frame = 2
Query:  179 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            T+YY+ILGV  SA+ +E+KKAYRK A+K HPDK  D  EKFK + QAYEVLSDP+KRDIYDQ GE A+KEG  G+ +  +P DIF+                   ++G++VVH L V+LEDLYNG TKKL+L +N++C                  C+G GM++  +QIG GM+QQ+Q VC
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGSGSPSFSSPMDIFD-------MFFGGGGRMTRERRGKNVVHQLSVTLEDLYNGITKKLALQKNVICEKCEGIGGKKGSVEKCPLCKGRGMQVHIQQIGPGMVQQIQTVC 178          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.001e-39
Identity = 85/181 (46.96%), Postives = 115/181 (63.54%), Query Frame = 2
Query:  179 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            T YY++LGV  +AT++ELKKAYRK A+K HPDK   + EKFK++ QAYEVLSD +KR++YD+ GE A+KEG G  G   +P DIF+                   ++G++VVH L V+LEDLYNG T+KL+L +N++C                  C+GTGM+I   QIG GM+QQ+Q VC
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFD--------MFFGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVC 176          
BLAST of FC929868 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.001e-39
Identity = 85/181 (46.96%), Postives = 115/181 (63.54%), Query Frame = 2
Query:  179 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITNRQIGLGMIQQMQHVC 718
            T YY++LGV  +AT++ELKKAYRK A+K HPDK   + EKFK++ QAYEVLSD +KR++YD+ GE A+KEG G  G   +P DIF+                   ++G++VVH L V+LEDLYNG T+KL+L +N++C                  C+GTGM+I   QIG GM+QQ+Q VC
Sbjct:    5 TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQAIKEG-GAGGGFGSPMDIFD-------MFFGGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVC 177          
The following BLAST results are available for this feature:
BLAST of FC929868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH2_ALLPO1.737e-6763.87DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH_CUCSA6.178e-6564.40DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH_ATRNU3.066e-6461.78DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH9.863e-6363.02Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNAJ3_ARATH1.682e-6263.54Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO4.014e-5662.35DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJA4_HUMAN2.364e-4048.62DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA4_MOUSE3.087e-4048.62DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA1_PONAB2.001e-3946.96DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_HUMAN2.001e-3946.96DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionC34001C10EF PostHarvC1 Citrus clementina cDNA clone C34001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929868 ID=FC929868; Name=FC929868; organism=Citrus clementina; type=EST; length=720bp
GGAAATGCGCTTTGTGACGAGTGAGAGTTGAGAGGGACGATTGAAAATTC
TCCCTCTTAAGCCTCGTATCTCAAAATTCGCTCTCTCAGCTTCGAAATCT
TAGTTTAAAGGTTAGAATTGTATCACATACTGAAGTGATTCAATCATGTT
TGGTCGTACCCCAAGAAGAAGTAATAACACCAAGTATTATGAAATTCTTG
GTGTTTCGAAAAGTGCTACTGAAGATGAACTTAAGAAGGCATATAGAAAA
GCTGCTATGAAGAATCATCCCGACAAAGGTGGAGACCCTGAGAAGTTCAA
GGAGTTGGGTCAAGCTTATGAGGTTCTTTCTGATCCGGAGAAAAGAGATA
TTTATGATCAATATGGTGAAGATGCTCTTAAAGAAGGAATGGGAGGAGCT
GGGGCAGCTCATAATCCATTTGATATATTTGAATCATTTTTTGGTGGAGG
AACTTTTGGTGCTGGTGGTAGCTCAAGAGGTAGAAGGCGGAAGCAAGGTG
AAGATGTTGTGCATACTCTGAAGGTCTCCTTGGAGGACTTGTACAATGGG
ACAACTAAGAAACTCTCTCTTTCAAGGAATATTCTGTGCCCTAAATGCAA
AGGGAAAGGTTCTAAAAGTGGGGCCTTGGGAAAATGTTATGGTTGCCAAG
GTACTGGAATGAAAATCACNAACAGGCAGATTGGACTTGGCATGATTCAA
CAGATGCAACATGTCTGTCC
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