FC929875

Overview
NameFC929875
Unique NameFC929875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15058 contig Ccv1_Contig15058:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929875 vs. ExPASy Swiss-Prot
Match: LEGA_PEA (Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 52/221 (23.53%), Postives = 91/221 (41.18%), Query Frame = 1
Query:  130 GGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLP---------------------EKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHK-----------AGEFTNFFL-------------TGANGIFTGFSTEFVSRAWDLDVNTVKTLVGNQTGK---GIVKLDANAKL---PEPKKEHRDG 639
            GG    W PN     R   +  ++  L++N    P+Y ++ +  ++ QG+G  G+V P                     ++ +KV   ++GD IA+P G+V W YN +DT ++ + L D    +            AG     FL                N IF+GF  +++  A++++ + V  L G    +    IVK+     +   PE +  H+ G
Sbjct:   49 GGLIETWNPNN-KQFRCAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQENEGNNIFSGFKRDYLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVKGGLSIISPPEKQARHQRG 268          
BLAST of FC929875 vs. ExPASy Swiss-Prot
Match: LEGA2_PEA (Legumin A2 OS=Pisum sativum GN=LEGA2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 53/221 (23.98%), Postives = 90/221 (40.72%), Query Frame = 1
Query:  130 GGSYHAWCPNELPMLRQGNIGAAKLALEKNGFALPHYCDSARVAYVLQGSGVAGIVLP---------------------EKEEKVVAIKKGDGIALPFGVVTWWYNKEDTELVVLFLGDTSKGHK-----------AGEFTNFFL-------------TGANGIFTGFSTEFVSRAWDLDVNTVKTLVGNQTGK---GIVKLDANAKL---PEPKKEHRDG 639
            GG    W PN     R   +  ++  L+ N    P+Y ++ +  ++ QG+G  G+V P                     ++ +KV   ++GD IA+P G+V W YN +DT ++ + L D    +            AG     FL                N IF+GF  +F+  A++++ + V  L G    +    IVK+     +   PE +  H+ G
Sbjct:   50 GGLIETWNPNN-KQFRCAGVALSRATLQHNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLRYQHQQGGKQEQENEGNNIFSGFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVKGGLSIISPPEKQARHQRG 269          
The following BLAST results are available for this feature:
BLAST of FC929875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LEGA_PEA2.951e-1123.53Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1[more]
LEGA2_PEA2.951e-1123.98Legumin A2 OS=Pisum sativum GN=LEGA2 PE=3 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC34001D05EF PostHarvC1 Citrus clementina cDNA clone C34001D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929875 ID=FC929875; Name=FC929875; organism=Citrus clementina; type=EST; length=706bp
GGATTGAAACCAAAAAAGAAGAACAACAATATATAATCTTCTTCTTGTTT
GTTAGTATTTCTTTAGCGAAAGAAAAATATGGAGATTGATTTGACACCAA
AGTTGGCAAAGCAAGTTTATGGTGGCAATGGAGGTTCCTATCATGCTTGG
TGCCCCAATGAGTTGCCCATGTTGCGTCAGGGTAACATAGGTGCTGCTAA
GCTTGCTCTTGAAAAGAATGGCTTTGCTCTCCCTCATTACTGTGATTCCG
CTAGAGTCGCTTATGTCCTTCAAGGAAGTGGTGTGGCTGGAATTGTCCTT
CCTGAGAAGGAAGAGAAGGTTGTGGCAATCAAGAAGGGTGATGGCATTGC
TCTTCCCTTTGGTGTTGTTACTTGGTGGTACAACAAGGAGGACACTGAAC
TGGTAGTTTTGTTCTTGGGTGATACCTCAAAAGGCCACAAAGCTGGTGAA
TTCACTAACTTCTTTTTGACTGGTGCCAATGGCATCTTCACTGGCTTCTC
AACTGAGTTTGTCAGTCGAGCATGGGACTTGGATGTGAATACTGTCAAAA
CCCTTGTTGGGAATCAAACTGGAAAGGGAATTGTCAAACTCGATGCTAAT
GCCAAGCTGCCTGAGCCAAAGAAGGAACACCGCGATGGTATGGCCTTTAA
TTGTGAGGAAAGCTCACTAGATGTCGACATTAAGAATGGTGGAAGGGTTG
TGCTTT
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