FC929881

Overview
NameFC929881
Unique NameFC929881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_STRCO (Allantoinase OS=Streptomyces coelicolor GN=allB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 68/182 (37.36%), Postives = 107/182 (58.79%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARYKELYL 690
            L S R++TP+G  + +V +  G  I+ V   D P  +   ++ D G+ V++PGL+D H H++DPGRTEWEGF +            L+DMPLNS P T + + L+ K + A  + ++DVGFWGG +P+N  +   L  L  AGV G K+F+ PSG+++FP  +   +   L+ +A +  L +
Sbjct:    8 LRSTRVITPEGTRAASVAVT-GEKITAVLPYDAPVPAGA-RLEDVGDHVVLPGLVDTHVHVNDPGRTEWEGFWTATRAAAAGGITTLVDMPLNSIPPTTTVDNLRTKREVAADKAHIDVGFWGGALPDNVKD---LRPLHEAGVFGFKAFLSPSGVDEFPHLDQEQLARSLAEIAAFDGLLI 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_STRAW (Allantoinase OS=Streptomyces avermitilis GN=allB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 66/183 (36.07%), Postives = 107/183 (58.47%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEE-DWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARYKELYL 690
            L S R++TP+G    AV +  G I +++  + + P  ++   + D G+ V++PGL+D H H++DPGRT WEGF +            L+DMPLNS P T +   L+ K D A  + ++DVGFWGG +P+N  +   L  L +AGV G K+F+ PSG+++FP  +   +   ++ +A +  L +
Sbjct:    8 LRSTRVITPEGTRPAAVAVAAGKITAVLPHDAEVPAGAR---LEDLGDDVLLPGLVDTHVHVNDPGRTHWEGFWTATRAAAAGGITTLVDMPLNSLPPTTTVGNLRTKRDVAADKAHIDVGFWGGALPDNVKD---LRPLHDAGVFGFKAFLSPSGVDEFPELDQERLARSMAEIAGFGGLLI 184          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALN_RANCA (Allantoinase, mitochondrial OS=Rana catesbeiana GN=ALN PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28
Identity = 63/184 (34.24%), Postives = 106/184 (57.61%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARYKELYLY 693
            + SKR++    + S  + I +G I S+++   W ++  +G +++D G+ V+M G+ID H H+++PGRT+WEG+ +            ++DMPLNS P T S      K+ AA+++ YVDV FWGG++P+N      L  +L AGV G K F+  SG+ +FP  + + +   +S L     + L+
Sbjct:   21 IRSKRVIQANTISSCDIIISDGKISSVLA---WGKHVTSGAKLLDVGDLVVMAGIIDPHVHVNEPGRTDWEGYRTATLAAAAGGITAIVDMPLNSLPPTTSVTNFHTKLQAAKRQCYVDVAFWGGVIPDNQVE---LIPMLQAGVAGFKCFLINSGVPEFPHVSVTDLHTAMSELQGTNSVLLF 198          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALN_YEAST (Allantoinase OS=Saccharomyces cerevisiae GN=DAL1 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.888e-27
Identity = 62/167 (37.13%), Postives = 96/167 (57.49%), Query Frame = 1
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARYKELYLY 693
            +++ EG   S+V E+      +   + +     I+PGL+D H HL++PGRT WEGF +            ++DMPLN+ P T + E  ++K++AAE +++ DVGFWGGLVP   +N   L  L+ AGV G K F+  SG+ +FP     +I+E L VLA    + ++
Sbjct:   32 LDVLEG---SVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP---HNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMF 192          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALN1_DICDI (Probable allantoinase 1 OS=Dictyostelium discoideum GN=allB1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26
Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQ--VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARYKE 681
            +  K++V    +   ++ IK G II I   +D+    K     +++  + VIM GL+D H H+++PGRTEWEGF S            +IDMPLNS P T + E L+ K+++   ++ VDVG  GG++P N+   S +  +L  GV+G KSF+  SGI++FP      I+E ++V+ + K+
Sbjct:   10 IKGKKVVINGEIKPASILIKNGIIIDI---KDYSSEIKEEHEVLIEEEKLVIMGGLVDSHVHINEPGRTEWEGFLSATSAAASGGVTTIIDMPLNSSPVTTTFENLQTKIESMPGKLRVDVGLLGGIIPGNSSEISRM--VLEGGVVGFKSFLVHSGIDEFPHVKEDDIQEAMNVMKKLKD 185          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALN2_DICDI (Probable allantoinase 2 OS=Dictyostelium discoideum GN=allB2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25
Identity = 72/211 (34.12%), Postives = 106/211 (50.24%), Query Frame = 1
Query:  124 LPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG-----------------------EAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARYKELY 687
            L +  + L++K       VI G   I  GN+I +       RN KT  + DY                        + +IM GL+D H H+++PGRTEWEGF S            ++DMPLNS P T S + L  K+++ + ++ VDVG  GG+VP N+     +  +L  GVLG KSF+ PSGI++FP  N + I+E ++ +   K  Y
Sbjct:   13 LLFQNFVLSAKNDDNKLKVIRGRNVIYNGNVIPL---SILIRNGKTIGIKDYSFNPKKLNENYEILYDDRECNNNEDFIIMGGLVDSHVHVNEPGRTEWEGFESATSAAAAGGVTTIVDMPLNSSPVTTSFKNLLDKIESMKGKLRVDVGLLGGIVPGNSKEIKKM--VLQGGVLGFKSFLLPSGIDEFPPVNENDIQEAMNEMKLLKCQY 218          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_DEIRA (Allantoinase OS=Deinococcus radiodurans GN=allB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 59/172 (34.30%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  160 IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLARY 675
            +VTP+G     + I  G I  +  E   P      Q +D     + PG++D H HL++PGRT WEGF +             +DMPLNS P  ++ E  + K    E++  +D G WGGL P    N   L+ L   GV+GLK+FM  SG+++FP  +   + EG+    R+
Sbjct:   12 LVTPEGERRADLGIVGGQIAELTDEIATP----AAQTLDVSGLHVFPGVLDDHVHLNEPGRTHWEGFETGTQALAAGGATSFLDMPLNSSPPVLTRERFEDKARLGEEKSLIDFGLWGGLTP---LNLDQLDDLAECGVIGLKAFMSHSGLDEFPAADDLTLYEGMRTAKRH 176          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_BACHD (Allantoinase OS=Bacillus halodurans GN=allB PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 64/175 (36.57%), Postives = 91/175 (52.00%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLA 669
            + S  +VT        V I+ G I+S ++E     +S  G  +D     + PG++DVH H ++PGRTEWEGF S              DMPLNS+P TI+ E L  K   A ++  VD  FWGGLVP    N   L+ L + GV+G K+FM   G +DF   +   + +G+  +A
Sbjct:    8 IRSSTVVTETTTYRADVAIRNG-IVSAITEPG-SISSDDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPG---NIDHLQDLHDGGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIA 177          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_DESHY (Allantoinase OS=Desulfitobacterium hafniense (strain Y51) GN=allB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLAR 672
            L +  +V P GV    + + +G I+ I   E+ P ++K  +V+D     + PG+ D H H +DPGRTEWE   +              DMPLN  P T+       K+  A+K   VD GFWGGL    + N   L+ L   GV+G K+F C SGI++FP  +      G+  LA+
Sbjct:    8 LRNGNVVCPDGVRKADIAVSDGKIVLIA--EEIPGDAK--EVIDAAGKHVFPGITDGHVHFNDPGRTEWETISTGSSALAAGGGVAYFDMPLNCSPCTLDAVNFNNKLAVAQKDSLVDYGFWGGL---TSANLDKLDELAECGVIGFKAFACHSGIDEFPRMDDYTALVGMEKLAK 176          
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_DESHD (Allantoinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=allB PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  145 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPXDNASHIKEGLSVLAR 672
            L +  +V P GV    + + +G I+ I   E+ P ++K  +++D     I PG+ D H H +DPGRTEWE   +              DMPLN  P T+       K+  A+K   VD GFWGGL    + N   L+ L   GV+G K+F C SGI++FP  +      G+  LA+
Sbjct:    8 LRNGNVVCPDGVRKADIAVSDGKIVLIA--EEIPGDAK--EIIDAAGKHIFPGITDGHVHFNDPGRTEWETITTGSSALAAGGGVAYFDMPLNCSPCTLDAVNFNNKLAVAQKDSLVDYGFWGGL---TSANLDKLDELAECGVIGFKAFACHSGIDEFPRMDDYTALVGMEKLAK 176          
The following BLAST results are available for this feature:
BLAST of FC929881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ALLB_STRCO3.616e-3037.36Allantoinase OS=Streptomyces coelicolor GN=allB PE... [more]
ALLB_STRAW3.616e-3036.07Allantoinase OS=Streptomyces avermitilis GN=allB P... [more]
ALN_RANCA7.541e-2834.24Allantoinase, mitochondrial OS=Rana catesbeiana GN... [more]
ALN_YEAST4.888e-2737.13Allantoinase OS=Saccharomyces cerevisiae GN=DAL1 P... [more]
ALN1_DICDI5.404e-2635.91Probable allantoinase 1 OS=Dictyostelium discoideu... [more]
ALN2_DICDI5.975e-2534.12Probable allantoinase 2 OS=Dictyostelium discoideu... [more]
ALLB_DEIRA1.472e-2334.30Allantoinase OS=Deinococcus radiodurans GN=allB PE... [more]
ALLB_BACHD1.472e-2336.57Allantoinase OS=Bacillus halodurans GN=allB PE=1 S... [more]
ALLB_DESHY5.592e-2334.66Allantoinase OS=Desulfitobacterium hafniense (stra... [more]
ALLB_DESHD5.592e-2334.66Allantoinase OS=Desulfitobacterium hafniense (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34001D12EF PostHarvC1 Citrus clementina cDNA clone C34001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929881 ID=FC929881; Name=FC929881; organism=Citrus clementina; type=EST; length=698bp
AGAGGAATGGAGAATCTCAATCTGCAGTGGAGGCTGTTGCCTACGCTAAC
ACTGCTAGCTGCTTCTCTGTTCTTGCTTGTTTTTAAGGATTCTGCCAAGT
TATCTCACAGTGAGTGCAGTCTCCTTCCTTACAACCAGTACTGGTTAACC
AGCAAGCGGATTGTGACACCAAAAGGAGTTATTTCTGGTGCAGTTGAGAT
CAAGGAAGGGAATATCATATCCATTGTTTCAGAAGAAGATTGGCCTCGGA
ACTCCAAGACAGGACAAGTAGTTGATTATGGAGAGGCTGTTATCATGCCT
GGTTTGATTGATGTGCATGCACATCTCGATGATCCAGGAAGAACTGAGTG
GGAAGGATTTCCTTCGGGGACCAAAGCAGCTGCTGCAGGTGGTATAACAA
CATTAATTGACATGCCCCTCAATAGCGATCCCTCAACTATCTCAACGGAA
ACTCTGAAATTAAAGGTTGATGCAGCAGAGAAGAGAATCTATGTTGATGT
TGGTTTTTGGGGAGGTCTAGTTCCTGAAAATGCATATAATGCAAGTGCTC
TAGAAGCTCTTTTGAATGCTGGTGTTCTTGGATTAAAGTCTTTTATGTGT
CCTTCAGGGATCAACGACTTTCCTATNGACAATGCCAGCCATATTAAGGA
AGGACTATCTGTATTGGCAAGATACAAAGAACTTTACTTGTACATGCT
back to top