FC929882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 8.641e-54 Identity = 105/129 (81.40%), Postives = 114/129 (88.37%), Query Frame = 2 Query: 26 MASEKEXXXXXVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 M+SEKE + DSPTIFDKII KEIPS VVYED+KVLAFRDI PQAPTHILIIPKVKDGLTGL+KAEERH EILG LLY AK+VAKQEGLEDG+R+VINDGP+G QSV+HIHVHLLGGRQMN PPG Sbjct: 1 MSSEKEAALRRL-DDSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTGLAKAEERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 128
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.757e-49 Identity = 94/112 (83.93%), Postives = 102/112 (91.07%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII+KEIPS VVYEDDKVLAFRDI PQ P HIL+IPKV+DGLTGL KAEERH +ILGRLLYTAKLVAKQEGL++GFRIVINDGP G QSV+HIHVHL+GGRQMN PPG Sbjct: 2 TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFKAEERHIDILGRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: Y1390_SYNE7 (Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32 Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII +EIP+ +VYEDD LAFRD+ PQAP HIL+IPK + L +A H +LG LL T K +A QEGL +G+R VIN GP GGQ+V+H+H+HLLGGR + PPG Sbjct: 5 TIFGKIIRREIPADIVYEDDLCLAFRDVAPQAPVHILVIPK--QPIANLLEATAEHQALLGHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT1_BOVIN (Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.614e-31 Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII KEIP+K++YEDD+ LAF DI PQAPTH L+IPK ++ +S AE+ +LG L+ K A GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMN PPG Sbjct: 17 TIFGKIIRKEIPAKIIYEDDQCLAFHDISPQAPTHFLVIPKKY--ISQISAAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT2_HUMAN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo sapiens GN=HINT2 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.026e-31 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 2 Query: 71 SPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 +PTIF +I++K +P+ ++YED + L FRD+ PQAP H L+IPK + +S+AEE ++LG LL AK AK EGL DG+R+VINDG G QSV+H+H+H+LGGRQ+ PPG Sbjct: 52 APTIFSRILDKSLPADILYEDQQCLVFRDVAPQAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT2_BOVIN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus GN=HINT2 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.026e-31 Identity = 61/114 (53.51%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 71 SPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 +PTIF +I+++ +P+ ++YED + LAFRD+ PQAP H L+IPK + +S+AEE ++LG LL AK AK EGL DG+R+VINDG G QSV+H+H+H+LGGRQ+ PPG Sbjct: 52 APTIFSRILDRSLPADILYEDQQCLAFRDVAPQAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT1_RABIT (Histidine triad nucleotide-binding protein 1 OS=Oryctolagus cuniculus GN=HINT1 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.870e-31 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S AE+ +LG L+ K A GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMN PPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKH--ISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT1_RAT (Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus GN=Hint1 PE=1 SV=5) HSP 1 Score: 132.109 bits (331), Expect = 2.290e-30 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S A++ +LG L+ K A GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMN PPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT1_MOUSE (Histidine triad nucleotide-binding protein 1 OS=Mus musculus GN=Hint1 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.290e-30 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 77 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK ++ +S A++ +LG L+ K A GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMN PPG Sbjct: 17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126
BLAST of FC929882 vs. ExPASy Swiss-Prot
Match: HINT2_MOUSE (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Mus musculus GN=Hint2 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.991e-30 Identity = 57/114 (50.00%), Postives = 86/114 (75.44%), Query Frame = 2 Query: 71 SPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNGPPG 412 SPTIF +I+++ +P+ ++YED + L FRD+ PQAP H L+IP+ + +S+AEE ++LG LL AK +A+ +GL+DG+R+V+NDG G QSV+H+H+H+LGGRQ+ PPG Sbjct: 52 SPTIFSRILDRSLPADILYEDQQCLVFRDVAPQAPVHFLVIPRKP--IPRISQAEEDDQQLLGHLLLVAKKIAQAQGLKDGYRLVVNDGKMGAQSVYHLHIHVLGGRQLQWPPG 163 The following BLAST results are available for this feature:
BLAST of FC929882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929882 ID=FC929882; Name=FC929882; organism=Citrus clementina; type=EST; length=631bpback to top |