FC929888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2) HSP 1 Score: 322.013 bits (824), Expect = 1.855e-87 Identity = 160/178 (89.89%), Postives = 174/178 (97.75%), Query Frame = 1 Query: 157 KNFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 KNF+QI+RERLLYEMLRSAKTG+SKSTWKVLIMDKLTVKIMS++CKMADITQEGVSLVEDI RRRQPLPSM+AIYFIQPTKENVIMFLSDMSG+SPLYKKAFVFFSSP+S+ELV HIKKDS+VLPRIGALREMNLE+FAIDSQGF+TD ERALE+LFGDEE SR+GDACLNVMASRIA Sbjct: 16 KNFRQITRERLLYEMLRSAKTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVEDIFRRRQPLPSMDAIYFIQPTKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELVGHIKKDSSVLPRIGALREMNLEFFAIDSQGFITDHERALEDLFGDEETSRKGDACLNVMASRIA 193
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3) HSP 1 Score: 256.529 bits (654), Expect = 9.571e-68 Identity = 125/179 (69.83%), Postives = 155/179 (86.59%), Query Frame = 1 Query: 157 KNFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFG-DEENSRRGDACLNVMASRIA 690 K F+QISR+RLL+EML S KTG SK+ WK+LIMD++TVK+MS SCKMADIT +G+SLVE++ +RR+P+P M+AIYFIQP+KEN++MFLSDMSGR PLY+KAF+FFSS I +ELV HIK DS+VLPRIGALREMN+EYF ID+QGF+TD E+ALE L+ D ENSR CLN+MA+RIA Sbjct: 19 KFFRQISRDRLLHEMLGSTKTGDSKA-WKILIMDRVTVKVMSQSCKMADITDQGISLVEELFKRREPMPGMDAIYFIQPSKENIVMFLSDMSGREPLYRKAFIFFSSTIPKELVNHIKSDSSVLPRIGALREMNMEYFPIDNQGFLTDHEQALETLYAEDAENSRHFHICLNIMATRIA 196
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.058e-66 Identity = 128/179 (71.51%), Postives = 154/179 (86.03%), Query Frame = 1 Query: 157 KNFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDE-ENSRRGDACLNVMASRIA 690 ++F+QI+R+RLL+EMLRS K +SKS WKVLIMDKLTVKIMS SCKMAD+ +EGVSLVED++ RRQPLP M+AIYFIQPTKEN+ +F+SDMSG+ PLYKKA+VFFSSP+ RELV IKKDS V RIGAL EMNLEYFAIDSQGF TD ++ALEELF + E S + ++CLN+MA+RIA Sbjct: 16 RSFRQITRDRLLFEMLRSTKK-SSKSAWKVLIMDKLTVKIMSFSCKMADVMEEGVSLVEDLYMRRQPLPLMDAIYFIQPTKENIRIFMSDMSGKIPLYKKAYVFFSSPVQRELVAQIKKDSNVRARIGALSEMNLEYFAIDSQGFTTDHDKALEELFSENAEGSLKYNSCLNMMATRIA 193
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.528e-65 Identity = 123/178 (69.10%), Postives = 148/178 (83.15%), Query Frame = 1 Query: 157 KNFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 KNF+QI+RERLL EMLR + G+SK TWKVL+MDK TVKIMS +CKM++ITQ G+SLVE I + RQP+ +ME IYFIQPT+ENV FLSDM+G+SPLYKKAFVFFSSP+SR LV IKKD + RIG L+EMNLEY ++D QGFVT++E ALEELF D+EN +R DACLNV+A RIA Sbjct: 16 KNFRQITRERLLCEMLRPERNGSSKLTWKVLVMDKFTVKIMSSACKMSEITQGGISLVEVITKHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFFSSPVSRSLVNVIKKDMRAMKRIGGLKEMNLEYISMDIQGFVTNNENALEELFCDDENHQRADACLNVVAKRIA 193
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.253e-59 Identity = 108/178 (60.67%), Postives = 147/178 (82.58%), Query Frame = 1 Query: 157 KNFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K F+ I R+R+L ++L+ K +KS+WKVLIMDK TV+IM+++CKMA+IT G+SLVED+ +RR+P+PSM+AIYF+QP KENVIM LSDMSGR PLY+KA++FFSSPI +ELV++IK DS+V+PRIGALREMNLE+FAID QGF TD + A +L+ + NS++ + ++ MA+RIA Sbjct: 16 KIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIA 193
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: UNC18_CAEEL (Putative acetylcholine regulator unc-18 OS=Caenorhabditis elegans GN=unc-18 PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23 Identity = 56/139 (40.29%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 184 RLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTD 600 +LL +++R K G +S W VLI+D L ++++S CKM +I +EG+++VED+++RR+PLP++EAIY I PT E++ + D R+ LYK A VFF+ S +L + + K S I L+E+N+ + +SQ F D Sbjct: 92 KLLNDVIRPLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRREPLPTLEAIYLIAPTAESIDKLIQDYCARN-LYKCAHVFFTEACSDQLFSTLSK-SAAARFIKTLKEINIAFTPYESQVFNLD 228
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB2_RAT (Syntaxin-binding protein 2 OS=Rattus norvegicus GN=Stxbp2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 61/176 (34.66%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPL-YKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++L ++RS K WKVLIMD +++I+S CKM+DI EG+++VEDI++RR+P+PS+EAIY + PT+++V ++D G YK A +FF+ L + + + S + + L+E++L + ++Q F D + L+ RG L+V+A +IA Sbjct: 7 KAVVVEKILSGVIRSVK---KDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFQGTPTFTYKAAHIFFTDTCPEPLFSELGR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERGRQ-LDVLAQQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB2_MOUSE (Syntaxin-binding protein 2 OS=Mus musculus GN=Stxbp2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 60/176 (34.09%), Postives = 102/176 (57.95%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPL-YKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENSRRGDACLNVMASRIA 690 K + E++L ++RS K WKVLIMD +++I+S CKM+DI EG+++VEDI++RR+P+PS+EAIY + PT+++V ++D G YK A +FF+ L + + + S + + L+E++L + ++Q F D + L+ RG L+ +A +IA Sbjct: 7 KAVVGEKILSGVIRSVK---KDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFQGTPTFTYKAAHIFFTDTCPEPLFSELGR-SRLAKAVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAGERGRQ-LDALAQQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB2_HUMAN (Syntaxin-binding protein 2 OS=Homo sapiens GN=STXBP2 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22 Identity = 63/179 (35.20%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPL-YKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEEL---FGDEENSRRGDACLNVMASRIA 690 K + E++L ++RS K WKVLIMD +++I+S CKM+DI EG+++VEDI++RR+P+PS+EAIY + PT+++V + D G YK A +FF+ L + + + S + + L+E++L + ++Q F D + L F EE +R+ L V+A +IA Sbjct: 7 KAVVGEKILSGVIRSVK---KDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIKDFQGTPTFTYKAAHIFFTDTCPEPLFSELGR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRAEERTRQ----LEVLAQQIA 177
BLAST of FC929888 vs. ExPASy Swiss-Prot
Match: STXB2_CANFA (Syntaxin-binding protein 2 OS=Canis familiaris GN=STXBP2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22 Identity = 55/155 (35.48%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 166 KQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPL-YKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELF 627 K++ E++L ++RS K WKVLIMD +++I+S CKM+DI EG+++VEDI++RR+P+PS+EAIY + PT+++V ++D G YK A +FF+ L T + + S + + L+E++L + ++Q F D + L+ Sbjct: 7 KEVVGEKILNGVIRSVK---KDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHIFFTDTCPEPLFTELSR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLY 157 The following BLAST results are available for this feature:
BLAST of FC929888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929888 ID=FC929888; Name=FC929888; organism=Citrus clementina; type=EST; length=692bpback to top |